RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CSMD1Q96PZ7 3565 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 CDHR4A6H8M9 788 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 GMNCA6NCL1 334 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 HSPB2A8KAH6 182 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 EIF1AXP47813 144 aaKnown RBP19.56■□□□□ 0.72
SCN1B-206ENST00000638536 SLC6A8P48029 635 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 CDK6Q00534 326 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 PON3Q15166 354 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 HSPB2Q16082 182 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 MTDHQ86UE4 582 aaKnown RBP19.56■□□□□ 0.72
SCN1B-206ENST00000638536 COMTD1Q86VU5 262 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 TREML1Q86YW5 311 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 OR10D3Q8NH80 312 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 MRGPRX4Q96LA9 322 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 EXOSC3Q9NQT5 275 aaKnown RBP19.56■□□□□ 0.72
SCN1B-206ENST00000638536 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
SCN1B-206ENST00000638536 SLC22A20A6NK97 555 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 ADAMDEC1O15204 470 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 CXCL13O43927 109 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 AQP8O94778 261 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 RCBTB2O95199 551 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 PGCP20142 388 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 NANOGP8Q6NSW7 305 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 CHMP1BQ7LBR1 199 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 CMIPQ8IY22 773 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 CCDC106Q9BWC9 280 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 TMEM38AQ9H6F2 299 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 NANOGQ9H9S0 305 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 KCNJ16Q9NPI9 418 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 ACER3Q9NUN7 267 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 FREM1Q5H8C1 2179 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 TACC2O95359 2948 aa19.55■□□□□ 0.72
SCN1B-206ENST00000638536 TMEM247A6NEH6 219 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 SNX3O60493 162 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PABPC4LP0CB38 370 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 TMIGD3P0DMS9 266 aaPredicted RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PRG2P13727 222 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ELK4P28324 431 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 IDH2P48735 452 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 GZMMP51124 257 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 SCARB2Q14108 478 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 TRMT5Q32P41 509 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 TMEM176BQ3YBM2 270 aaPredicted RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 LIN52Q52LA3 116 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 RABL3Q5HYI8 236 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PLEKHM3Q6ZWE6 761 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ZNF563Q8TA94 476 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ST8SIA1Q92185 356 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 LRRC58Q96CX6 371 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 KLHL15Q96M94 604 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PIF1Q9H611 641 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 KAT8Q9H7Z6 458 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 COQ10BQ9H8M1 238 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 C5orf58C9J3I9 102 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 MRASO14807 208 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 FRS3O43559 492 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ME2P23368 584 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 CTSSP25774 331 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 AQP1P29972 269 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ADSLP30566 484 aaPredicted RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ACAA2P42765 397 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 EEFSECP57772 596 aaKnown RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 MERTKQ12866 999 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 EPS8Q12929 822 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 GNA13Q14344 377 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 SGCBQ16585 318 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 MMEL1Q495T6 779 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ZNF311Q5JNZ3 666 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PRAMEF8Q5VWM4 474 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 PRAMEF7Q5VXH5 474 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 REEP3Q6NUK4 255 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ESPNLQ6ZVH7 1005 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 OR10A6Q8NH74 314 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 OR2V1Q8NHB1 315 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 BBS10Q8TAM1 723 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 TM9SF2Q99805 663 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 SRXN1Q9BYN0 137 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 CTPS2Q9NRF8 586 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 ZNF629Q9UEG4 869 aaPredicted RBP19.54■□□□□ 0.72
SCN1B-206ENST00000638536 CORO2BQ9UQ03 480 aa19.54■□□□□ 0.72
SCN1B-206ENST00000638536 APCP25054 2843 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 A0A1W2PNR3 127 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 GCM2O75603 506 aaPredicted RBP19.53■□□□□ 0.72
SCN1B-206ENST00000638536 THBS1P07996 1170 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 DLX5P56178 289 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 RPS3AP61247 264 aaKnown RBP19.53■□□□□ 0.72
SCN1B-206ENST00000638536 CYLC2Q14093 348 aaPredicted RBP19.53■□□□□ 0.72
SCN1B-206ENST00000638536 GLIPR1L2Q4G1C9 344 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 RNF220Q5VTB9 566 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 HBMQ6B0K9 141 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 PPP4R4Q6NUP7 873 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 P4HA3Q7Z4N8 544 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 CPLX4Q7Z7G2 160 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 OSTF1Q92882 214 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 RCN3Q96D15 328 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 DNAJA3Q96EY1 480 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 CHST11Q9NPF2 352 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 MRGBPQ9NV56 204 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 USP22Q9UPT9 525 aa19.53■□□□□ 0.72
SCN1B-206ENST00000638536 ANKHD1Q8IWZ3 2542 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms