RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TRIM36Q9NQ86 728 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 PCDHGA5Q9Y5G8 931 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CASP8AP2Q9UKL3 1982 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 KIF26AQ9ULI4 1882 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CD8AP01732 235 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ANXA7P20073 488 aaKnown RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 TACR2P21452 398 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 MAT2AP31153 395 aaKnown RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 NUBP1P53384 320 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 CRYBB1P53674 252 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 IRF8Q02556 426 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 FAM180BQ6P0A1 224 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 PODNL1Q6PEZ8 512 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ABHD13Q7L211 337 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 REC114Q7Z4M0 266 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF707Q96C28 371 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ECHDC3Q96DC8 303 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 C14orf144Q96I85 54 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 ZC3H10Q96K80 434 aaKnown RBP11.17□□□□□ -0.62
CAPN3-221ENST00000638141 A4GNTQ9UNA3 340 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 PRSS21Q9Y6M0 314 aa11.17□□□□□ -0.62
CAPN3-221ENST00000638141 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM189-UBE2V1I3L0A0 370 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 GAPDHSO14556 408 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 PPIHO43447 177 aaKnown RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 PRAMEF4O60810 478 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 OR8U8P0C7N1 319 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 EPXP11678 715 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 CBR1P16152 277 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TYMPP19971 482 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 UQCRC2P22695 453 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 CTGFP29279 349 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 IFNGR2P38484 337 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 PNLIPRP2P54317 469 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 CDH4P55283 916 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF763Q0D2J5 394 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ERV3-1Q14264 604 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SSX2Q16385 188 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 UPP1Q16831 310 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 PRAMEF9Q5VWM5 478 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 HEPHL1Q6MZM0 1159 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 IL34Q6ZMJ4 242 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 KDF1Q8NAX2 398 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 MORN4Q8NDC4 146 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 OR4K5Q8NGD3 323 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 OR1J4Q8NGS1 313 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 C15orf40Q8WUR7 153 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SCLYQ96I15 445 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 NEU1Q99519 415 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 INPP5EQ9NRR6 644 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 OR6C74A6NCV1 312 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 LRIT2A6NDA9 550 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ANHXE9PGG2 379 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 E9PI62 339 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 F5H5T6 163 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SLC25A12O75746 678 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 PCDH8O95206 1070 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 C6orf47O95873 294 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 MMP3P08254 477 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 IL3P08700 152 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SLC25A4P12235 298 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ACP5P13686 325 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ATF1P18846 271 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ACHEP22303 614 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 GPR15P49685 360 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SP3Q02447 781 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 CSRP2Q16527 193 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF385BQ569K4 471 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF296Q8WUU4 475 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 MRPS31Q92665 395 aaKnown RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 EDAQ92838 391 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TAAR9Q96RI9 348 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TEAD3Q99594 435 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SEPT5Q99719 369 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 ASB8Q9H765 288 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 MVB12BQ9H7P6 319 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TUBA4BQ9H853 241 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 GDE1Q9NZC3 331 aa11.16□□□□□ -0.62
CAPN3-221ENST00000638141 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-221ENST00000638141 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 TXNL1O43396 289 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 LATS1O95835 1130 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 POMCP01189 267 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 SLC2A1P11166 492 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 CD79AP11912 226 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 CERS1P27544 350 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 NSG1P42857 185 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms