RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SMYD1Q8NB12 490 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 OR2T12Q8NG77 320 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 GPR32P1Q8NGA4 272 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 ST8SIA1Q92185 356 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 ADGRG7Q96K78 797 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 TUBA1CQ9BQE3 449 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 ALG2Q9H553 416 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 CAMK2AQ9UQM7 478 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 CFAP73A6NFT4 308 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 AHRRA9YTQ3 701 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 TOXO94900 526 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 PEPDP12955 493 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 GABRA1P14867 456 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 PGCP20142 388 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 POU3F2P20265 443 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-217ENST00000621474 CD247P20963 164 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ELK4P28324 431 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 CPOXP36551 454 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 SLC6A8P48029 635 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 IDH2P48735 452 aaKnown RBP12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF136P52737 540 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 CASP6P55212 293 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 RAC1P63000 192 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ERICH5Q6P6B1 374 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 RPTNQ6XPR3 784 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 KRT73Q86Y46 540 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ARMC8Q8IUR7 673 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ZPLD1Q8TCW7 415 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 PHF10Q8WUB8 498 aaKnown RBP12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 TMEM185BQ9H7F4 350 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 SPAG4Q9NPE6 437 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ACER3Q9NUN7 267 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ALKBH4Q9NXW9 302 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF232Q9UNY5 417 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 AP4B1Q9Y6B7 739 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ADGRG4Q8IZF6 3080 aa12.89□□□□□ -0.35
CBWD3-217ENST00000621474 ELOVL7A1L3X0 281 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PRORSD1PA6NEY8 169 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 TPST2O60704 377 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ZG16O60844 167 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 AGFG2O95081 481 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 OPN1LWP04000 364 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 GCKP35557 465 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 GSK3BP49841 420 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 HOXC5Q00444 222 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 CDSNQ15517 529 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PLEKHM3Q6ZWE6 761 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 MICU2Q8IYU8 434 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 SPATA5L1Q9BVQ7 753 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PINK1Q9BXM7 581 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PACSIN3Q9UKS6 424 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 USP9YO00507 2555 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PTPN13Q12923 2485 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 SEC14L5O43304 696 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 SERPINB7O75635 380 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 GLI4P10075 376 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 HTR2AP28223 471 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PTGER4P35408 488 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 KCNJ5P48544 419 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 NUP107P57740 925 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 INTS11Q5TA45 600 aaKnown RBP12.88□□□□□ -0.35
CBWD3-217ENST00000621474 NSUN5P2Q63ZY6 315 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 PATL1Q86TB9 770 aaKnown RBP12.88□□□□□ -0.35
CBWD3-217ENST00000621474 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF440Q8IYI8 595 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 LILRA2Q8N149 483 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
CBWD3-217ENST00000621474 OR4D11Q8NGI4 311 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF563Q8TA94 476 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 TMEM234Q8WY98 164 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-217ENST00000621474 ADAM19Q9H013 955 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 CTPS2Q9NRF8 586 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
CBWD3-217ENST00000621474 A0A0J9YW62 118 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 H0Y3Z8 333 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 LGI1O95970 557 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 ESRRAP11474 423 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-217ENST00000621474 SLC1A3P43003 542 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 EEFSECP57772 596 aaKnown RBP12.87□□□□□ -0.35
CBWD3-217ENST00000621474 PMPCAQ10713 525 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms