RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	PPOX	P50336	477 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CCL11	P51671	97 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR4D2	P58180	307 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	STX5	Q13190	355 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	GPR68	Q15743	365 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	RGS21	Q2M5E4	152 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CLEC6A	Q6EIG7	209 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SLC48A1	Q6P1K1	146 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SPATA19	Q7Z5L4	167 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CACUL1	Q86Y37	369 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR52E4	Q8NGH9	312 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TWIST2	Q8WVJ9	160 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CIB1	Q99828	191 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	HOPX	Q9BPY8	73 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	MUC13	Q9H3R2	512 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ESRP2	Q9H6T0	727 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	C3orf14	Q9HBI5	128 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	AASS	Q9UDR5	926 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	MMP24	Q9Y5R2	645 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SMIM31	A0A1B0GVY4	71 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR7A17	O14581	309 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	AZIN1	O14977	448 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	PIP5K1B	O14986	540 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ITGA10	O75578	1167 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	NKX2-2	O95096	273 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SPN	P16150	400 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TYRP1	P17643	537 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SLC6A2	P23975	617 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	OPRL1	P41146	370 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	DIO3	P55073	304 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CLDN18	P56856	261 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	FASTK	Q14296	549 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	RNPS1	Q15287	305 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	INTS11	Q5TA45	600 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATP1A1-AS1	Q5TC04	95 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	IL23R	Q5VWK5	629 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF544	Q6NX49	715 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	PAQR3	Q6TCH7	311 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	PAGE2	Q7Z2X7	111 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	EPHX4	Q8IUS5	362 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CCDC103	Q8IW40	242 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	FAM47B	Q8NA70	645 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CATSPER1	Q8NEC5	780 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	NUP37	Q8NFH4	326 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR5H6	Q8NGV6	325 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	STAG3L4	Q8TBR4	150 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEM125	Q96AQ2	219 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ISOC1	Q96CN7	298 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TEX37	Q96LM6	180 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TSNARE1	Q96NA8	513 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	DGCR6L	Q9BY27	220 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ANKRD60	Q9BZ19	345 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	NECTIN3	Q9NQS3	549 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	SDHAF3	Q9NRP4	125 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	EXD2	Q9NVH0	621 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CMTM6	Q9NX76	183 aa		4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZMAT5	Q9UDW3	170 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	PRRC2A	P48634	2157 aa	Known RBP	4.88	□□□□□ -1.63
CBWD3-215	ENST00000619322	TRBV5-3	A0A0A0MS03	114 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		A0A0G2JNJ9	132 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CIB4	A0PJX0	185 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF503-AS2	A6NEH8	195 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SAC3D1	A6NKF1	404 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	AQP12B	A6NM10	295 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SNTN	A6NMZ2	147 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	NDUFS4	O43181	175 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TNFSF13	O75888	250 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CDH1	P12830	882 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	IDO1	P14902	403 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TACR1	P25103	407 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	IL12A	P29459	219 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	EIF1	P41567	113 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	HSPA13	P48723	471 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	EPS8	Q12929	822 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	FLOT2	Q14254	428 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF267	Q14586	743 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	MTX3	Q5HYI7	312 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATAD3B	Q5T9A4	648 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEM236	Q5W0B7	351 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR4C11	Q6IEV9	310 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ADNP2	Q6IQ32	1131 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	KRT80	Q6KB66	452 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	AQP12A	Q8IXF9	295 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	RIMKLA	Q8IXN7	391 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	C9orf40	Q8IXQ3	194 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PACRGL	Q8N7B6	248 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	LINC00469	Q8N7U9	141 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SLC2A12	Q8TD20	617 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	VSTM2L	Q96N03	204 aa		4.87	□□□□□ -1.63

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