RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 CADM2Q8N3J6 435 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 TOR1AIP2Q8NFQ8 470 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 NIPSNAP1Q9BPW8 284 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 KLHDC3Q9BQ90 382 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 ANGPTL4Q9BY76 406 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 MAN2C1Q9NTJ4 1040 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 SLC7A7Q9UM01 511 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 MYRFQ9Y2G1 1151 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
TMEM254-213ENST00000613758 TRIM64A6NGJ6 449 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 WDPCPO95876 746 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 CBLP22681 906 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 ELAVL4P26378 380 aaKnown RBP12.55□□□□□ -0.4
TMEM254-213ENST00000613758 EPHA2P29317 976 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
TMEM254-213ENST00000613758 TUBA3CQ13748 450 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 DCST1Q5T197 706 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF691Q5VV52 312 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 TUBA3EQ6PEY2 450 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF227Q86WZ6 799 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 RIBC2Q9H4K1 309 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 CPNE5Q9HCH3 593 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 PLA2G3Q9NZ20 509 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 PPP4R1LQ9P1A2 415 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 LRFN1Q9P244 771 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 KCNMB2Q9Y691 235 aa12.55□□□□□ -0.4
TMEM254-213ENST00000613758 A0A1B0GWA3 101 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ANKRD33BA6NCL7 494 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
TMEM254-213ENST00000613758 CCNB2O95067 398 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 NUDT14O95848 222 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 P04436 131 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ANXA8P13928 327 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ISL1P61371 349 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 CBFBQ13951 182 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SEC23BQ15437 767 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 THAP5Q7Z6K1 395 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 GABARAPL3Q9BY60 117 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ANKRD19PQ9H560 264 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF552Q9H707 407 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-213ENST00000613758 PROK2Q9HC23 129 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 HHATLQ9HCP6 504 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 MED11Q9P086 117 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 A0A0B4J2E0 115 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 A0A1B0GX12 115 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 ARRDC5A6NEK1 342 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 FAAHO00519 579 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 LYPD3O95274 346 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 PGCP20142 388 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 MSX1P28360 303 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 WBP2NLQ6ICG8 309 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SPINK14Q6IE38 97 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 TTC33Q6PID6 262 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-213ENST00000613758 NKAIN4Q8IVV8 208 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 APLFQ8IW19 511 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-213ENST00000613758 C8orf59Q8N0T1 100 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-213ENST00000613758 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SLC38A4Q969I6 547 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 FRMD6Q96NE9 622 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SACM1LQ9NTJ5 587 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 SELENONQ9NZV5 590 aa12.54□□□□□ -0.4
TMEM254-213ENST00000613758 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 SH3PXD2BA1X283 911 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 B4DXG7 233 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 G3V3Y1 287 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 CDK2AP1O14519 115 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 BCKDKO14874 412 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 GASTP01350 101 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 TFAP2AP05549 437 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 ELK4P28324 431 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 NPRL3Q12980 569 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 MFAP5Q13361 173 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 KEAP1Q14145 624 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 INPP5JQ15735 1006 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 TOMM34Q15785 309 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 KCTD21Q4G0X4 260 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 FBLIM1Q8WUP2 373 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 MRPS26Q9BYN8 205 aaKnown RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 DSN1Q9H410 356 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 NDRG4Q9ULP0 352 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms