RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 Q6ZT83 130 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 GALNT5Q7Z7M9 940 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 OR5D16Q8NGK9 328 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 ZNF300Q96RE9 604 aaPredicted RBP13.17□□□□□ -0.3
CTSA-216ENST00000607212 PSD2Q9BQI7 771 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 THUMPD3Q9BV44 507 aaKnown RBP13.17□□□□□ -0.3
CTSA-216ENST00000607212 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
CTSA-216ENST00000607212 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 KCNE3Q9Y6H6 103 aa13.17□□□□□ -0.3
CTSA-216ENST00000607212 SULT2B1O00204 365 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
CTSA-216ENST00000607212 RAD51DO75771 328 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 MATN1P21941 496 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 RPS26P62854 115 aaKnown RBP13.16□□□□□ -0.3
CTSA-216ENST00000607212 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
CTSA-216ENST00000607212 CHRNEQ04844 493 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 MERTKQ12866 999 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 PGS1Q32NB8 556 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 BHLHB9Q6PI77 547 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 NATD1Q8N6N6 113 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 ZNF563Q8TA94 476 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 ZHX1-C8orf76Q96EF9 292 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 DNAJA3Q96EY1 480 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 TRAF4Q9BUZ4 470 aaPredicted RBP13.16□□□□□ -0.3
CTSA-216ENST00000607212 TRIM2Q9C040 744 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 BCO1Q9HAY6 547 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 ABCA1O95477 2261 aa13.16□□□□□ -0.3
CTSA-216ENST00000607212 SERINC4A6NH21 518 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 A8MV72 311 aaPredicted RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 NPHS1O60500 1241 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 CYTIPO60759 359 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 CSTAP01040 98 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 UBTFL6P0CB48 400 aaPredicted RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 IGHV1-2P23083 117 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 ZNF83P51522 516 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 NRF1Q16656 503 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 EXOSC6Q5RKV6 272 aaKnown RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 IL23RQ5VWK5 629 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 KLHL17Q6TDP4 642 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 RNF165Q6ZSG1 346 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 ZCCHC23Q6ZST2 131 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 C16orf62Q7Z3J2 963 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 OR52N5Q8NH56 324 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 TMEM234Q8WY98 164 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 DUSP26Q9BV47 211 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 MECRQ9BV79 373 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 CACNG6Q9BXT2 260 aa13.15□□□□□ -0.3
CTSA-216ENST00000607212 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 SPIN1Q9Y657 262 aaPredicted RBP13.15□□□□□ -0.3
CTSA-216ENST00000607212 CADP27708 2225 aa13.15□□□□□ -0.31
CTSA-216ENST00000607212 SONP18583 2426 aaKnown RBP13.14□□□□□ -0.31
CTSA-216ENST00000607212 DUXAA6NLW8 204 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 M0R1B8 84 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 SMAD9O15198 467 aaKnown RBP13.14□□□□□ -0.31
CTSA-216ENST00000607212 H6PDO95479 791 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 PGCP20142 388 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 DIO1P49895 249 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 CASP9P55211 416 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 TIMM23BQ5SRD1 257 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 TMEM108Q6UXF1 575 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 SSX8Q7RTT4 187 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 FBXL14Q8N1E6 418 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 ST8SIA1Q92185 356 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 TUBGCP3Q96CW5 907 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 SDF2Q99470 211 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 EXD2Q9NVH0 621 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 PCDHGB4Q9UN71 923 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 B3GALT5Q9Y2C3 310 aa13.14□□□□□ -0.31
CTSA-216ENST00000607212 RNF103-CHMP3A0A140T963 221 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 A0A1W2PR80 420 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 FAM234BA2RU67 622 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 ZNF724A8MTY0 619 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 SHISA9B4DS77 424 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 SPAG7O75391 227 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 STX11O75558 287 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 AK1P00568 194 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 FGF4P08620 206 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 CCNA2P20248 432 aa13.13□□□□□ -0.31
CTSA-216ENST00000607212 PRPS1L1P21108 318 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms