RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 TMIGD3P0DMS9 266 aaPredicted RBP10□□□□□ -0.81
VRK3-210ENST00000596121 ARAFP10398 606 aa10□□□□□ -0.81
VRK3-210ENST00000596121 IL7RP16871 459 aa10□□□□□ -0.81
VRK3-210ENST00000596121 KLK2P20151 261 aa10□□□□□ -0.81
VRK3-210ENST00000596121 DRD4P21917 467 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ADH6P28332 368 aa10□□□□□ -0.81
VRK3-210ENST00000596121 SFTPDP35247 375 aa10□□□□□ -0.81
VRK3-210ENST00000596121 EIF1AXP47813 144 aaKnown RBP10□□□□□ -0.81
VRK3-210ENST00000596121 GZMMP51124 257 aa10□□□□□ -0.81
VRK3-210ENST00000596121 CRISP3P54108 245 aa10□□□□□ -0.81
VRK3-210ENST00000596121 MTPNP58546 118 aa10□□□□□ -0.81
VRK3-210ENST00000596121 GUSBP1Q15486 140 aa10□□□□□ -0.81
VRK3-210ENST00000596121 SLC25A35Q3KQZ1 300 aa10□□□□□ -0.81
VRK3-210ENST00000596121 TMEM176BQ3YBM2 270 aaPredicted RBP10□□□□□ -0.81
VRK3-210ENST00000596121 GCNT6Q5T4J0 391 aa10□□□□□ -0.81
VRK3-210ENST00000596121 PLEKHM3Q6ZWE6 761 aa10□□□□□ -0.81
VRK3-210ENST00000596121 GRAMD2AQ8IUY3 354 aa10□□□□□ -0.81
VRK3-210ENST00000596121 CMIPQ8IY22 773 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ATP6V1C2Q8NEY4 427 aa10□□□□□ -0.81
VRK3-210ENST00000596121 OR2V1Q8NHB1 315 aa10□□□□□ -0.81
VRK3-210ENST00000596121 NFKBIDQ8NI38 313 aa10□□□□□ -0.81
VRK3-210ENST00000596121 PMM1Q92871 262 aa10□□□□□ -0.81
VRK3-210ENST00000596121 OSTF1Q92882 214 aa10□□□□□ -0.81
VRK3-210ENST00000596121 MARVELD3Q96A59 401 aa10□□□□□ -0.81
VRK3-210ENST00000596121 KLHL15Q96M94 604 aa10□□□□□ -0.81
VRK3-210ENST00000596121 TM9SF2Q99805 663 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ELAC2Q9BQ52 826 aaKnown RBP10□□□□□ -0.81
VRK3-210ENST00000596121 CCDC106Q9BWC9 280 aa10□□□□□ -0.81
VRK3-210ENST00000596121 SRXN1Q9BYN0 137 aa10□□□□□ -0.81
VRK3-210ENST00000596121 RAD21L1Q9H4I0 556 aa10□□□□□ -0.81
VRK3-210ENST00000596121 COQ10BQ9H8M1 238 aa10□□□□□ -0.81
VRK3-210ENST00000596121 RNF122Q9H9V4 155 aa10□□□□□ -0.81
VRK3-210ENST00000596121 CHST11Q9NPF2 352 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ACER3Q9NUN7 267 aa10□□□□□ -0.81
VRK3-210ENST00000596121 ZNF629Q9UEG4 869 aaPredicted RBP10□□□□□ -0.81
VRK3-210ENST00000596121 ZNF443Q9Y2A4 671 aaPredicted RBP10□□□□□ -0.81
VRK3-210ENST00000596121 A0A1W2PNR3 127 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 A0A1W2PNV4 684 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 DYNC1I1O14576 645 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 TPST1O60507 370 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 IL18BPO95998 194 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 PGCP20142 388 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 ELK4P28324 431 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 LSP1P33241 339 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 KIR2DL2P43627 348 aaPredicted RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 IDH2P48735 452 aaKnown RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 EEFSECP57772 596 aaKnown RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 HOXC5Q00444 222 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 CDK6Q00534 326 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 MERTKQ12866 999 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 EPS8Q12929 822 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 NFYCQ13952 458 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 GLIPR1L2Q4G1C9 344 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 RABL3Q5HYI8 236 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 PRAMEF8Q5VWM4 474 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 PRAMEF7Q5VXH5 474 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 REP15Q6BDI9 236 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 NANOGP8Q6NSW7 305 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 VWA1Q6PCB0 445 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 MEX3BQ6ZN04 569 aaKnown RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 ESPNLQ6ZVH7 1005 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 SNX32Q86XE0 403 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 ADGRG3Q86Y34 549 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 TREML1Q86YW5 311 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 PEX5LQ8IYB4 626 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 ROBO4Q8WZ75 1007 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 ST8SIA1Q92185 356 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 STARD4Q96DR4 205 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 SPOCK3Q9BQ16 436 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 WFDC6Q9BQY6 131 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 TMEM38AQ9H6F2 299 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 KAT8Q9H7Z6 458 aaKnown RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 NANOGQ9H9S0 305 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 CTPS2Q9NRF8 586 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 THUMPD1Q9NXG2 353 aaKnown RBP9.99□□□□□ -0.81
VRK3-210ENST00000596121 CALML5Q9NZT1 146 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 USP22Q9UPT9 525 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 ZNF175Q9Y473 711 aa9.99□□□□□ -0.81
VRK3-210ENST00000596121 SYT5O00445 386 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 DVL2O14641 736 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 FRS3O43559 492 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 CGAP01215 116 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 PABPC4LP0CB38 370 aaKnown RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 ENPP1P22413 925 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 PPIBP23284 216 aaKnown RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 OPRM1P35372 400 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 CARD18P57730 90 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 RPS3AP61247 264 aaKnown RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 SCARB2Q14108 478 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 SGCBQ16585 318 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 FBXL19-AS1Q494R0 122 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 LIN52Q52LA3 116 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 RNF220Q5VTB9 566 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 HBMQ6B0K9 141 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 CHMP1BQ7LBR1 199 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 P4HA3Q7Z4N8 544 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 SPATA21Q7Z572 469 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 NET1Q7Z628 596 aaPredicted RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 BTLAQ7Z6A9 289 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 SERPINA11Q86U17 422 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms