RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PAICSP22234 425 aaKnown RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ELAVL4P26378 380 aaKnown RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 DPP4P27487 766 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 PSMB4P28070 264 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 NAMPTP43490 491 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CSNK1EP49674 416 aaKnown RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ACADVLP49748 655 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RGS7P49802 495 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 BCAP31P51572 246 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 PSMD7P51665 324 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 C21orf59P57076 290 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RGS8P57771 180 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RAB11AP62491 216 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CCZ1BP86790 482 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CCZ1P86791 482 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 RAB11BQ15907 218 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 EXT1Q16394 746 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 MOGAT2Q3SYC2 334 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 GPR33Q49SQ1 333 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 LACTB2Q53H82 288 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 THEM4Q5T1C6 240 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF530Q6P9A1 599 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 Q6ZPB1 254 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 LRRC34Q8IZ02 419 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF519Q8TB69 540 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 UBA3Q8TBC4 463 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CHPT1Q8WUD6 406 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 GATAD1Q8WUU5 269 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF707Q96C28 371 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 C18orf12Q96KH6 178 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 TSNARE1Q96NA8 513 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF317Q96PQ6 595 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 NPAS2Q99743 824 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 SELENOSQ9BQE4 189 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM175Q9BSA9 504 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CHRDL1Q9BU40 450 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 FGFBP2Q9BYJ0 223 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ANKRD60Q9BZ19 345 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 TRIM15Q9C019 465 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 MAGT1Q9H0U3 335 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 UPF3AQ9H1J1 476 aaKnown RBP4.17□□□□□ -1.74
SMAD4-216ENST00000593223 FBXO44Q9H4M3 255 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF160Q9HCG1 818 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 NT5MQ9NPB1 228 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ONECUT1Q9UBC0 465 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 CDH9Q9ULB4 789 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 OR10H1Q9Y4A9 318 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 MTCH2Q9Y6C9 303 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ABCC4O15439 1325 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 ZZEF1O43149 2961 aa4.17□□□□□ -1.74
SMAD4-216ENST00000593223 VPS13AQ96RL7 3174 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PTPN13Q12923 2485 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PLXNA1Q9UIW2 1896 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 DUOX1Q9NRD9 1551 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 TRBV5-5A0A0J9YX44 114 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 C1orf232A0A0U1RR37 186 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1B0GUA9 196 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1B0GUH1 482 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1W2PQ72 361 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 A0A1W2PR80 420 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ASB14A6NK59 587 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 OR2AG2A6NM03 316 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 OR5K4A6NMS3 321 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 C9JVG2 144 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 H3BQV1 296 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 FLRT2O43155 660 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 HLA-DRAP01903 254 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ALOX5P09917 674 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CCL2P13500 99 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CPA3P15088 417 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 IL9P15248 144 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PRKACGP22612 351 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CCNOP22674 350 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 NAA10P41227 235 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 MAGEA9P43362 315 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 TSFMP43897 325 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RPS5P46782 204 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 HSPA13P48723 471 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CCR4P51679 360 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CDH6P55285 790 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 MTCP1P56278 107 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 GUCY2DQ02846 1103 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 LRRC63Q05C16 580 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SLC34A1Q06495 639 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SELPLGQ14242 412 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RFTN1Q14699 578 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PTGISQ16647 500 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CTU2Q2VPK5 515 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ADPRMQ3LIE5 342 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 XKR7Q5GH72 579 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CTSL3PQ5NE16 218 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 IL23RQ5VWK5 629 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RFWD3Q6PCD5 774 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 FAM159AQ6UWV7 190 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SYT10Q6XYQ8 523 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 FCRLAQ7L513 359 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SSX9Q7RTT3 188 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 C16orf62Q7Z3J2 963 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms