RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 AQP8O94778 261 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 SYNGR4O95473 234 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 NUDT7P0C024 238 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 NID1P14543 1247 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 IL7RP16871 459 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 SLC6A8P48029 635 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 CARD18P57730 90 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.33
DDX39A-217ENST00000592391 CGB2Q6NT52 195 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 C3orf33Q6P1S2 294 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 TSPEARQ8WU66 669 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 OSTF1Q92882 214 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 STARD4Q96DR4 205 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-217ENST00000592391 NDUFAF1Q9Y375 327 aa13.02□□□□□ -0.33
DDX39A-217ENST00000592391 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 FBN2P35556 2912 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 A0A0G2JPF8 293 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 HNRNPCL3B7ZW38 293 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 ADAM11O75078 769 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 HNRNPCL4P0DMR1 293 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 RYKP34925 604 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 KIR2DL2P43627 348 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 ARFIP2P53365 341 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 MERTKQ12866 999 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 GUSBP1Q15486 140 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 TMEM176BQ3YBM2 270 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 LIN52Q52LA3 116 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 RPS26P11Q5JNZ5 115 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 PLEKHM3Q6ZWE6 761 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 VRK2Q86Y07 508 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 KIF18BQ86Y91 864 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 DPP10Q8N608 796 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 ATP6V1C2Q8NEY4 427 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 MAL2Q969L2 176 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 BCL2L10Q9HD36 194 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 SERINC1Q9NRX5 453 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 MRGBPQ9NV56 204 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-217ENST00000592391 HEATR5AQ86XA9 2040 aa13.01□□□□□ -0.33
DDX39A-217ENST00000592391 CDHR4A6H8M9 788 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 A8MXE2 369 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 MSTNO14793 375 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 ANGPT2O15123 496 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SMNDC1O75940 238 aaKnown RBP eCLIP13□□□□□ -0.339e-7■■□□□ 12.6
DDX39A-217ENST00000592391 THBS1P07996 1170 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SLC7A1P30825 629 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 APOBEC1P41238 236 aaKnown RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 KIR2DL3P43628 341 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 CPA2P48052 419 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 IDH2P48735 452 aaKnown RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 SIRPAP78324 504 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SORDQ00796 357 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 TLE4Q04727 773 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 MYBPHQ13203 477 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SNTB1Q13884 538 aaKnown RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF239Q16600 458 aaKnown RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 ZSWIM7Q19AV6 140 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 RNF220Q5VTB9 566 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF836Q6ZNA1 936 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 FAM214BQ7L5A3 538 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 GRINAQ7Z429 371 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 RETREG3Q86VR2 466 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF440Q8IYI8 595 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 C10orf111Q8N326 155 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 CPNE4Q96A23 557 aaPredicted RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 GMPPAQ96IJ6 420 aaPredicted RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF559Q9BR84 538 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 CCDC106Q9BWC9 280 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 IKZF5Q9H5V7 419 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 COQ10BQ9H8M1 238 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 RLIMQ9NVW2 624 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 GALNT8Q9NY28 637 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 CORO2BQ9UQ03 480 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
DDX39A-217ENST00000592391 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
DDX39A-217ENST00000592391 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms