RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PEX5LQ8IYB4 626 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CNEP1R1Q8N9A8 125 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 ATP6V1C2Q8NEY4 427 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM234Q8WY98 164 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 ST8SIA1Q92185 356 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CNOT9Q92600 299 aaKnown RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 OSTF1Q92882 214 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 RNASE6Q93091 150 aaKnown RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 KLHL15Q96M94 604 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM120AQ9BXJ8 343 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 PRRG4Q9BZD6 226 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 CCDC134Q9H6E4 229 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 EXOSC3Q9NQT5 275 aaKnown RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 ACER3Q9NUN7 267 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 JKAMPQ9P055 326 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 VAPAQ9P0L0 249 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 FOXD3Q9UJU5 478 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-223ENST00000591239 PDZD2O15018 2839 aa8.25□□□□□ -1.09
DNMT1-223ENST00000591239 TRBV5-3A0A0A0MS03 114 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 A0A0G2JPF8 293 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 GJE1A6NN92 205 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 HNRNPCL3B7ZW38 293 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 HNRNPCL1O60812 293 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 ADAM11O75078 769 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SYNGR4O95473 234 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 DBIP07108 87 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 HNRNPCL4P0DMR1 293 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 FCGR2AP12318 317 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 BMP2P12643 396 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 PPIBP23284 216 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SSTR2P30874 369 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 RYKP34925 604 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 KIR2DL2P43627 348 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SLC6A8P48029 635 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 MERTKQ12866 999 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SF3A3Q12874 501 aaKnown RBP eCLIP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SELENBP1Q13228 472 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 SNTB1Q13884 538 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 RPS26P11Q5JNZ5 115 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 MRPL2Q5T653 305 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 CGB2Q6NT52 195 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 C3orf33Q6P1S2 294 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 VWA1Q6PCB0 445 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 DLEU7Q6UYE1 221 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 LUZP2Q86TE4 346 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 OR52P1PQ8NH57 321 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF563Q8TA94 476 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 TSPEARQ8WU66 669 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 MAL2Q969L2 176 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 C14orf79Q96F83 325 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM19Q96HH6 336 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 RBM24Q9BX46 236 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 PIGMQ9H3S5 423 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 A4GALTQ9NPC4 353 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 RLIMQ9NVW2 624 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 KCNN3Q9UGI6 736 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 LEF1Q9UJU2 399 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 PACSIN3Q9UKS6 424 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 MCTS1Q9ULC4 181 aaKnown RBP8.24□□□□□ -1.09
DNMT1-223ENST00000591239 NDUFAF1Q9Y375 327 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 GMEB1Q9Y692 573 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 DSPPQ9NZW4 1301 aa8.24□□□□□ -1.09
DNMT1-223ENST00000591239 ANKHD1Q8IWZ3 2542 aaKnown RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CDHR4A6H8M9 788 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 A8MXE2 369 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 AP3D1O14617 1153 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 MSTNO14793 375 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 ANGPT2O15123 496 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 SMNDC1O75940 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 PLGP00747 810 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 SLC7A1P30825 629 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 PEX19P40855 299 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 APOBEC1P41238 236 aaKnown RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 KIR2DL3P43628 341 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CPA2P48052 419 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 IDH2P48735 452 aaKnown RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 ARFIP2P53365 341 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 SIRPAP78324 504 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 TLE4Q04727 773 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 MYBPHQ13203 477 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 LARS2Q15031 903 aaKnown RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 GUSBP1Q15486 140 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 PLEKHM3Q6ZWE6 761 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 RETREG3Q86VR2 466 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 VRK2Q86Y07 508 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 KIF18BQ86Y91 864 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 C10orf111Q8N326 155 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms