RNA–Protein interactions for RNA: ENST00000590595.1

SEPT9-231, Transcript of septin 9, human

TSL 3

Gene SEPT9, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-231	ENST00000590595	SMAD9	O15198	467 aa	Known RBP	14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	CFLAR	O15519	480 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	CYTIP	O60759	359 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	SMNDC1	O75940	238 aa	Known RBP eCLIP	14.36	□□□□□ -0.11	8e-7	■■■■□ 22
SEPT9-231	ENST00000590595	PPP3CB	P16298	524 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	ME2	P23368	584 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	KHK	P50053	298 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	SESN3	P58005	492 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	ADAM8	P78325	824 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	CBFB	Q13951	182 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	RNPS1	Q15287	305 aa	Known RBP	14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	C3orf33	Q6P1S2	294 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	PLEKHM3	Q6ZWE6	761 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	PMM1	Q92871	262 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	RAB8B	Q92930	207 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	C7orf26	Q96N11	449 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	OR52B2	Q96RD2	323 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	SLC39A3	Q9BRY0	314 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	EXD2	Q9NVH0	621 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	KLHL28	Q9NXS3	571 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	NDRG3	Q9UGV2	375 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	CLEC4A	Q9UMR7	237 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	WDR45	Q9Y484	360 aa		14.36	□□□□□ -0.11
SEPT9-231	ENST00000590595	CCDC154	A6NI56	674 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	TRPC5OS	A6NMA1	111 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	GJE1	A6NN92	205 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	OPN1LW	P04000	364 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	BMP2	P12643	396 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	IDO1	P14902	403 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	PAX1	P15863	534 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	COX5A	P20674	150 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	DNASE1	P24855	282 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	EDNRA	P25101	427 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	S100A3	P33764	101 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	SFTPD	P35247	375 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	CARD18	P57730	90 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	H3F3A	P84243	136 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	CHRNE	Q04844	493 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	PDK3	Q15120	406 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	GPR68	Q15743	365 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	COX20	Q5RI15	118 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	AGBL2	Q5U5Z8	902 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	HHAT	Q5VTY9	493 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	LRRC74B	Q6ZQY2	392 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	EIF3M	Q7L2H7	374 aa	Known RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZNF550	Q7Z398	422 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	NUFIP2	Q7Z417	695 aa	Known RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	RNF130	Q86XS8	419 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	CMIP	Q8IY22	773 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	ANKRD42	Q8N9B4	389 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	VPS37A	Q8NEZ2	397 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	PIWIL2	Q8TC59	973 aa	Known RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	STON2	Q8WXE9	905 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	ARL8A	Q96BM9	186 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	THUMPD3	Q9BV44	507 aa	Known RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	RSPO3	Q9BXY4	272 aa	Predicted RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	CENPH	Q9H3R5	247 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	MANSC1	Q9H8J5	431 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	BEX4	Q9NWD9	120 aa	Predicted RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	MARCO	Q9UEW3	520 aa	Predicted RBP	14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	PRDM4	Q9UKN5	801 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	LIPT1	Q9Y234	373 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	CHST2	Q9Y4C5	530 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	DNHD1	Q96M86	4753 aa		14.35	□□□□□ -0.11
SEPT9-231	ENST00000590595	GOLGA8Q	A0A0J9YX86	632 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	GOLGA8O	A6NCC3	632 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	CLDN24	A6NM45	220 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZNF716	A6NP11	495 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZNF724	A8MTY0	619 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZNF814	B7Z6K7	855 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	GOLGA8N	F8WBI6	632 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	DNPH1	O43598	174 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	CSTA	P01040	98 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	THBS1	P07996	1170 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	PABPC4L	P0CB38	370 aa	Known RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ENPP1	P22413	925 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	SLC16A1	P53985	500 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	CASP9	P55211	416 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	FOXD4	Q12950	439 aa	Predicted RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	SGCB	Q16585	318 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	GSTA3	Q16772	222 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	TMEM176B	Q3YBM2	270 aa	Predicted RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	TIGD2	Q4W5G0	525 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	PDSS1	Q5T2R2	415 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ATG16L1	Q676U5	607 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	EPGN	Q6UW88	154 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	FCRLA	Q7L513	359 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	SLC43A2	Q8N370	569 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ANKFN1	Q8N957	763 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	SLC25A43	Q8WUT9	341 aa	Predicted RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ROBO4	Q8WZ75	1007 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZBTB9	Q96C00	473 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	QRSL1	Q9H0R6	528 aa	Known RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	ZNF226	Q9NYT6	803 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	C6orf203	Q9P0P8	240 aa	Predicted RBP	14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	GPR52	Q9Y2T5	361 aa		14.34	□□□□□ -0.11
SEPT9-231	ENST00000590595	TRBV5-3	A0A0A0MS03	114 aa		14.33	□□□□□ -0.12
SEPT9-231	ENST00000590595	SYNGR4	O95473	234 aa		14.33	□□□□□ -0.12
SEPT9-231	ENST00000590595	IL6	P05231	212 aa		14.33	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms