RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 REG4Q9BYZ8 158 aa12.15□□□□□ -0.46
HDAC5-208ENST00000588419 GDF2Q9UK05 429 aaPredicted RBP12.15□□□□□ -0.46
HDAC5-208ENST00000588419 ACTL7BQ9Y614 415 aa12.15□□□□□ -0.46
HDAC5-208ENST00000588419 ABCA1O95477 2261 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 CENPVL1A0A0U1RR11 272 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 SERINC4A6NH21 518 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 ABCD4O14678 606 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 RAMP1O60894 148 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 ADAM11O75078 769 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 LYPLA1O75608 230 aaPredicted RBP12.14□□□□□ -0.47
HDAC5-208ENST00000588419 RAD51DO75771 328 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 CSTAP01040 98 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 FGF4P08620 206 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 DANCRP0C864 163 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 EDNRAP25101 427 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 OR3A2P47893 321 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 RAC3P60763 192 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 HBA1P69905 142 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 KRTAP1-1Q07627 177 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 IFFO1Q0D2I5 559 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 P2RY6Q15077 328 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 C6orf136Q5SQH8 315 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 Q6ZT83 130 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 CXXC5Q7LFL8 322 aaKnown RBP12.14□□□□□ -0.47
HDAC5-208ENST00000588419 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
HDAC5-208ENST00000588419 OR4A15Q8NGL6 344 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF563Q8TA94 476 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 MOAP1Q96BY2 351 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 SDF2Q99470 211 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 BHLHE41Q9C0J9 482 aaPredicted RBP12.14□□□□□ -0.47
HDAC5-208ENST00000588419 SLCO5A1Q9H2Y9 848 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 SERHL2Q9H4I8 314 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 MKS1Q9NXB0 559 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
HDAC5-208ENST00000588419 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 MKLN1Q9UL63 735 aa12.14□□□□□ -0.47
HDAC5-208ENST00000588419 A0A1W2PR80 420 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SULT2B1O00204 365 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SSX4O60224 188 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 EIF4E2O60573 245 aaKnown RBP12.13□□□□□ -0.47
HDAC5-208ENST00000588419 CYTIPO60759 359 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 CRLF1O75462 422 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SOX30O94993 753 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 IGHV4-39P01824 125 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 G6PDP11413 515 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 PRPS1L1P21108 318 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 ARRB2P32121 409 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 DIO1P49895 249 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SKP2Q13309 424 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 ETFDHQ16134 617 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 PDCD2Q16342 344 aaPredicted RBP12.13□□□□□ -0.47
HDAC5-208ENST00000588419 PGGHGQ32M88 737 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 OR4F3Q6IEY1 312 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 BHLHB9Q6PI77 547 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 NATD1Q8N6N6 113 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 OR52N5Q8NH56 324 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 PIWIL2Q8TC59 973 aaKnown RBP12.13□□□□□ -0.47
HDAC5-208ENST00000588419 TRIM2Q9C040 744 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SERINC1Q9NRX5 453 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 NPAP1Q9NZP6 1156 aa12.13□□□□□ -0.47
HDAC5-208ENST00000588419 ANK3Q12955 4377 aaKnown RBP12.13□□□□□ -0.47
HDAC5-208ENST00000588419 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 CIB4A0PJX0 185 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 NPIPB9F8W1W9 429 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 OVOL3O00110 214 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 STX11O75558 287 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 CPSF4O95639 269 aaKnown RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 GGT1P19440 569 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 PGCP20142 388 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 CCNA2P20248 432 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 RYKP34925 604 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF83P51522 516 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 NUDT6P53370 316 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 SESN3P58005 492 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 CHRNEQ04844 493 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 SPOCK1Q08629 439 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 SYT14P1Q58G82 188 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 TNFAIP8L2Q6P589 184 aaPredicted RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 C6orf120Q7Z4R8 191 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 GALNT5Q7Z7M9 940 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 ANKRD46Q86W74 232 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 TMEM234Q8WY98 164 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 HTRA1Q92743 480 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms