RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 NBL1P41271 181 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 LASP1Q14847 261 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PDZK1Q5T2W1 519 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 HEPHL1Q6MZM0 1159 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PWWP2BQ6NUJ5 590 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF730Q6ZMV8 503 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PRICKLE2Q7Z3G6 844 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 KIF18BQ86Y91 864 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 LAX1Q8IWV1 398 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 IQCF1Q8N6M8 205 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 AGBL5Q8NDL9 886 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 DOK4Q8TEW6 326 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TP53INP1Q96A56 240 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TRMT61AQ96FX7 289 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OR7D2Q96RA2 312 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SLC38A1Q9H2H9 487 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 POLHQ9Y253 713 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 KIF26BQ2KJY2 2108 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 A0A1W2PQL4 384 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TGFBR3LH3BV60 316 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 HCN1O60741 890 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OR5F1O95221 314 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 HLA-DQB1P01920 261 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 HLA-DPB1P04440 258 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 NT5EP21589 574 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OMPP47874 163 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RFX2P48378 723 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 BDH1Q02338 343 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 STX4Q12846 297 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RIN1Q13671 783 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF628Q5EBL2 1059 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ARHGAP40Q5TG30 622 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RHBDD2Q6NTF9 364 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FAM131AQ6UXB0 335 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 WDR53Q7Z5U6 358 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PPP1R3BQ86XI6 285 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CELF2-AS1Q8N7Q2 184 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC38A9Q8NBW4 561 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PSD4Q8NDX1 1056 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 NUP43Q8NFH3 380 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OR7G2Q8NG99 324 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OR52N1Q8NH53 320 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 C1GALT1C1Q96EU7 318 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 DIRAS2Q96HU8 199 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CDC6Q99741 560 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MTHFD2LQ9H903 347 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ASB6Q9NWX5 421 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZNF232Q9UNY5 417 aa13.83□□□□□ -0.2
CDK5RAP3-236ENST00000584991 AP3D1O14617 1153 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PLD2O14939 933 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 POLR1CO15160 346 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 AKAP8O43823 692 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ATP1B1P05026 303 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 BAK1Q16611 211 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC35F1Q5T1Q4 408 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 FAM111BQ6SJ93 734 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RDH10Q8IZV5 341 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC9A6Q92581 669 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PMM1Q92871 262 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CLIP3Q96DZ5 547 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 GPA33Q99795 319 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CACYBPQ9HB71 228 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ABCB9Q9NP78 766 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 LANCL2Q9NS86 450 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CCDC182A6NF36 153 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 OR10H2O60403 315 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TRIM3O75382 744 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 RFPL3O75679 317 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 IGHA1P01876 353 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SLC35E2P0CK97 266 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 LIMS3P0CW19 117 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 LIMS4P0CW20 117 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CCL4P13236 92 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MAOAP21397 527 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SOX18P35713 384 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 HSD17B7P56937 341 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 HNRNPA0Q13151 305 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 CRTC2Q53ET0 693 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 TRMT12Q53H54 448 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 AADACL4Q5VUY2 407 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 NXNL2Q5VZ03 156 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 C22orf42Q6IC83 251 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PAQR6Q6TCH4 344 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MBOAT2Q6ZWT7 520 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 BCDIN3DQ7Z5W3 292 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 BMPERQ8N8U9 685 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SIMC1Q8NDZ2 872 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ZC3HAV1LQ96H79 300 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 SOSTQ9BQB4 213 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 YIPF4Q9BSR8 244 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 KATNB1Q9BVA0 655 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 IRF2BPLQ9H1B7 796 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 MIXL1Q9H2W2 232 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
CDK5RAP3-236ENST00000584991 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms