RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SAR1AQ9NR31 198 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 LEF1Q9UJU2 399 aaPredicted RBP22.29■■□□□ 1.16
TTC39C-209ENST00000584250 CLEC4AQ9UMR7 237 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 NDUFAF1Q9Y375 327 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 DCHS2Q6V1P9 2916 aa22.29■■□□□ 1.16
TTC39C-209ENST00000584250 A0A1W2PNR3 127 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 DBIP07108 87 aaKnown RBP22.28■■□□□ 1.16
TTC39C-209ENST00000584250 IL7RP16871 459 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 PGCP20142 388 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 KIR2DL2P43627 348 aaPredicted RBP22.28■■□□□ 1.16
TTC39C-209ENST00000584250 FADDQ13158 208 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 RUNDC3AQ59EK9 446 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 ESPNLQ6ZVH7 1005 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 PLEKHM3Q6ZWE6 761 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 DHDDSQ86SQ9 333 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 LUZP2Q86TE4 346 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 PEX5LQ8IYB4 626 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 CLIP4Q8N3C7 705 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 DPP10Q8N608 796 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 NFKBIDQ8NI38 313 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 C10orf82Q8WW14 230 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 ZFP3Q96NJ6 502 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 SFXN3Q9BWM7 321 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 EXOSC3Q9NQT5 275 aaKnown RBP22.28■■□□□ 1.16
TTC39C-209ENST00000584250 ACER3Q9NUN7 267 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 GMEB1Q9Y692 573 aa22.28■■□□□ 1.16
TTC39C-209ENST00000584250 SYT5O00445 386 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 GKN3PP0CG01 181 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 ARAFP10398 606 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 GPX2P18283 190 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 KLK2P20151 261 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 EEF1A1P68104 462 aaKnown RBP22.27■■□□□ 1.16
TTC39C-209ENST00000584250 MERTKQ12866 999 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 KLF10Q13118 480 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 FBXL19-AS1Q494R0 122 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 BTLAQ7Z6A9 289 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 CNEP1R1Q8N9A8 125 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 ROBO4Q8WZ75 1007 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 ST8SIA1Q92185 356 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 STARD4Q96DR4 205 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 RAD21L1Q9H4I0 556 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 CTPS2Q9NRF8 586 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 CALML5Q9NZT1 146 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 STOML1Q9UBI4 398 aa22.27■■□□□ 1.16
TTC39C-209ENST00000584250 ZNF443Q9Y2A4 671 aaPredicted RBP22.27■■□□□ 1.16
TTC39C-209ENST00000584250 ANGPT2O15123 496 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 IDH2P48735 452 aaKnown RBP22.26■■□□□ 1.15
TTC39C-209ENST00000584250 SELENBP1Q13228 472 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 CAPRIN1Q14444 709 aaKnown RBP22.26■■□□□ 1.15
TTC39C-209ENST00000584250 GUSBP1Q15486 140 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 ADRM1Q16186 407 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 GCNT6Q5T4J0 391 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 CMIPQ8IY22 773 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 ZNF563Q8TA94 476 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 RNASE6Q93091 150 aaKnown RBP22.26■■□□□ 1.15
TTC39C-209ENST00000584250 DNAJA3Q96EY1 480 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 CGREF1Q99674 301 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 CCDC106Q9BWC9 280 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 KLHL14Q9P2G3 628 aa22.26■■□□□ 1.15
TTC39C-209ENST00000584250 A0A0G2JPF8 293 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 CDHR4A6H8M9 788 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 HNRNPCL2B2RXH8 293 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 HNRNPCL3B7ZW38 293 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 HNRNPCL1O60812 293 aaKnown RBP22.25■■□□□ 1.15
TTC39C-209ENST00000584250 PGM3O95394 542 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 HNRNPCL4P0DMR1 293 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 PRG2P13727 222 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 GYS2P54840 703 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 CARD18P57730 90 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 MTPNP58546 118 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 NFYCQ13952 458 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 COMTD1Q86VU5 262 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 PMM1Q92871 262 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 ANKRD27Q96NW4 1050 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 SLC39A3Q9BRY0 314 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 BCL2L10Q9HD36 194 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 THUMPD1Q9NXG2 353 aaKnown RBP22.25■■□□□ 1.15
TTC39C-209ENST00000584250 APCP25054 2843 aa22.25■■□□□ 1.15
TTC39C-209ENST00000584250 CCNA2P20248 432 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 ACAA2P42765 397 aaKnown RBP22.24■■□□□ 1.15
TTC39C-209ENST00000584250 SEC24CP53992 1094 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 KRTAP10-9P60411 292 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 EPS8Q12929 822 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 OR2A2Q6IF42 318 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 ADGRG3Q86Y34 549 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 TSPEARQ8WU66 669 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 TMEM234Q8WY98 164 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 PRRG4Q9BZD6 226 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 OPN3Q9H1Y3 402 aaPredicted RBP22.24■■□□□ 1.15
TTC39C-209ENST00000584250 PACSIN3Q9UKS6 424 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 MPDZO75970 2070 aa22.24■■□□□ 1.15
TTC39C-209ENST00000584250 IGHV3-15A0A0B4J1V0 119 aa22.23■■□□□ 1.15
TTC39C-209ENST00000584250 FRS3O43559 492 aa22.23■■□□□ 1.15
TTC39C-209ENST00000584250 SMNDC1O75940 238 aaKnown RBP eCLIP22.23■■□□□ 1.15
TTC39C-209ENST00000584250 SYNGR4O95473 234 aa22.23■■□□□ 1.15
TTC39C-209ENST00000584250 CGAP01215 116 aa22.23■■□□□ 1.15
TTC39C-209ENST00000584250 PPIBP23284 216 aaKnown RBP22.23■■□□□ 1.15
TTC39C-209ENST00000584250 CDK6Q00534 326 aa22.23■■□□□ 1.15
TTC39C-209ENST00000584250 ZNF239Q16600 458 aaKnown RBP22.23■■□□□ 1.15
TTC39C-209ENST00000584250 LIN52Q52LA3 116 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms