RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CEACAM8P31997 349 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 SRYQ05066 204 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 SNTB1Q13884 538 aaKnown RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 CBFBQ13951 182 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 CYLC2Q14093 348 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 SELPLGQ14242 412 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 SLC25A53Q5H9E4 307 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 RPS26P11Q5JNZ5 115 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 NSUN5P2Q63ZY6 315 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 REP15Q6BDI9 236 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 RP9Q8TA86 221 aaKnown RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 WDR60Q8WVS4 1066 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 CNOT9Q92600 299 aaKnown RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 LRRC58Q96CX6 371 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 RNF145Q96MT1 663 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 THUMPD3Q9BV44 507 aaKnown RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 MYLK2Q9H1R3 596 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 CALHM2Q9HA72 323 aa22.37■■□□□ 1.17
TSEN54-209ENST00000583454 GPC6Q9Y625 555 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 FLNAP21333 2647 aaKnown RBP22.37■■□□□ 1.17
TSEN54-209ENST00000583454 H0Y3Z8 333 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 FXYD1O00168 92 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 MRASO14807 208 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 CTAG2O75638 210 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 CYP7B1O75881 506 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 PGM3O95394 542 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 NTN1O95631 604 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 PRKCAP17252 672 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 SUCLG1P53597 346 aaKnown RBP22.36■■□□□ 1.17
TSEN54-209ENST00000583454 MTPNP58546 118 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 CDK6Q00534 326 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 CAPRIN1Q14444 709 aaKnown RBP22.36■■□□□ 1.17
TSEN54-209ENST00000583454 MMEL1Q495T6 779 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 LACC1Q8IV20 430 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 TMCO5AQ8N6Q1 288 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 TNIP2Q8NFZ5 429 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 BBS10Q8TAM1 723 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 KAT8Q9H7Z6 458 aaKnown RBP22.36■■□□□ 1.17
TSEN54-209ENST00000583454 DNAJB12Q9NXW2 375 aaKnown RBP22.36■■□□□ 1.17
TSEN54-209ENST00000583454 MED12LQ86YW9 2145 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 ABCA4P78363 2273 aa22.36■■□□□ 1.17
TSEN54-209ENST00000583454 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 FAM221AA4D161 298 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 H3BML4 177 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 THBS1P07996 1170 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 ETS2P15036 469 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 TIMP3P35625 211 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 CCR4P51679 360 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 CLDN20P56880 219 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 RAC1P63000 192 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 QPRTQ15274 297 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 MRPL2Q5T653 305 aaKnown RBP22.35■■□□□ 1.17
TSEN54-209ENST00000583454 NANOGP8Q6NSW7 305 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 REEP3Q6NUK4 255 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 VRK2Q86Y07 508 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 MEIOBQ8N635 442 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 PCYOX1LQ8NBM8 494 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 FBXO27Q8NI29 283 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 NFKBIDQ8NI38 313 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 ST8SIA1Q92185 356 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 MRGPRX4Q96LA9 322 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 NANOGQ9H9S0 305 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 STOML1Q9UBI4 398 aa22.35■■□□□ 1.17
TSEN54-209ENST00000583454 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 HSPB2A8KAH6 182 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 C5orf58C9J3I9 102 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 SYT5O00445 386 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 EFNA2O43921 213 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 COX4I1P13073 169 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 PGCP20142 388 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ELK4P28324 431 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ART1P52961 327 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 EEFSECP57772 596 aaKnown RBP22.34■■□□□ 1.17
TSEN54-209ENST00000583454 EEF1A1P68104 462 aaKnown RBP22.34■■□□□ 1.17
TSEN54-209ENST00000583454 FOXF1Q12946 379 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 HSPB2Q16082 182 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ZSWIM7Q19AV6 140 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 FBXL19-AS1Q494R0 122 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 LIN52Q52LA3 116 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 RNF220Q5VTB9 566 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 NET1Q7Z628 596 aaPredicted RBP22.34■■□□□ 1.17
TSEN54-209ENST00000583454 GGNQ86UU5 652 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 PTOV1Q86YD1 416 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 TREML1Q86YW5 311 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ZZZ3Q8IYH5 903 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 UBQLNLQ8IYU4 475 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 TRIB1Q96RU8 372 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ACER3Q9NUN7 267 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 IFT52Q9Y366 437 aa22.34■■□□□ 1.17
TSEN54-209ENST00000583454 MBD3L4A6NDZ8 208 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 MBD3L3A6NE82 208 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 MBD3L5A6NJ08 208 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 CLCA1A8K7I4 914 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 H0YC42 278 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 ADAM11O75078 769 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 SLC6A8P48029 635 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 IST1P53990 364 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 TPD52P55327 224 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms