RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 CFAP221Q4G0U5 840 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 TMEM52BQ4KMG9 183 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 C10orf120Q5SQS8 335 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 WSCD1Q658N2 575 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 FAM199XQ6PEV8 388 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 OR51G2Q8NGK0 314 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 OR5L2Q8NGL0 311 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 OR4D5Q8NGN0 318 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 OR2A12Q8NGT7 310 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 OR1F12Q8NHA8 337 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 ZPLD1Q8TCW7 415 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 ANKRD49Q8WVL7 239 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 RPL3LQ92901 407 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 VSIG2Q96IQ7 327 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 CELF6Q96J87 481 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 SMIM14Q96QK8 99 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 CYP2S1Q96SQ9 504 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC39A3Q9BRY0 314 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 Q9H3A6 140 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 GORASP2Q9H8Y8 452 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 LRRC40Q9H9A6 602 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 TNFRSF19Q9NS68 423 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 PAK1IP1Q9NWT1 392 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 SMPD3Q9NY59 655 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 B3GNT2Q9NY97 397 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 COX16Q9P0S2 106 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 WARS2Q9UGM6 360 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 TP53TG3Q9ULZ0 132 aa2.75□□□□□ -1.97
SMCHD1-209ENST00000583441 KDRP35968 1356 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 TRIOBPQ9H2D6 2365 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 A0A1B0GWB2 263 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 FCN1O00602 326 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 RS1O15537 224 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 PRKYO43930 277 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF254O75437 659 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 OPN1MWP04001 364 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 SEMG1P04279 462 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 OPN1MW2P0DN77 364 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 OPN1MW3P0DN78 364 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 IGLL1P15814 213 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 VDAC1P21796 283 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 LAP3P28838 519 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 P2RY1P47900 373 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 CEBPDP49716 269 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 PRKXP51817 358 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 RIPPLY3P57055 190 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 IGLV3-21P80748 117 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 BCL2L1Q07817 233 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 PRR30Q53SZ7 412 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 CENPPQ6IPU0 288 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 KCNIP4Q6PIL6 250 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 CCDC137Q6PK04 289 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 WDR74Q6RFH5 385 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 KDELC1Q6UW63 502 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 CXCL17Q6UXB2 119 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 C17orf82Q86X59 251 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 NRMQ8IXM6 262 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 KIR3DL3Q8N743 410 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 FAM133AQ8N9E0 248 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 TRPV1Q8NER1 839 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 BADQ92934 168 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 PELI1Q96FA3 418 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 COQ2Q96H96 371 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 CNPY3Q9BT09 278 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 RHBGQ9H310 441 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 GLIPR2Q9H4G4 154 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 EHD1Q9H4M9 534 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC17A5Q9NRA2 495 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 SMOXQ9NWM0 555 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 AK6Q9Y3D8 172 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 HCFC1P51610 2035 aa2.74□□□□□ -1.97
SMCHD1-209ENST00000583441 ATAD2BQ9ULI0 1458 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IGLV3-10A0A075B6K4 115 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IGHV1OR15-1A0A075B7D0 117 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 KLF18A0A0U1RQI7 1052 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 METTL21EPA6NDL7 271 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF705EA8MWA4 302 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 CXCL13O43927 109 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SNNO75324 88 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 GNA14O95837 355 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IGKV3-15P01624 115 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IGHV3-23P01764 117 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IGHG4P01861 327 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 LGALS2P05162 132 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 GIG44P09565 113 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 CCDC166P0CW27 439 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 PSMB1P20618 241 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 MMP11P24347 488 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ANXA13P27216 316 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 HOXD10P28358 340 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 FGF9P31371 208 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 RGRP47804 291 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 DAP3P51398 398 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 EFNB2P52799 333 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 FGL1Q08830 312 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 RIPK1Q13546 671 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 DPYSL2Q16555 572 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 AANATQ16613 207 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ISXQ2M1V0 245 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms