RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 LIN28AQ9H9Z2 209 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 SDHAF3Q9NRP4 125 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 INPP5EQ9NRR6 644 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 DTX4Q9Y2E6 619 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 SLC6A5Q9Y345 797 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 ZNF337Q9Y3M9 751 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 GOLGA4Q13439 2230 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 SPAG17Q6Q759 2223 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 LY6G6EA0A0G2JKS1 128 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 TMEM129A0AVI4 362 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SAGE2PA6NJ88 616 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 ALG1L2C9J202 215 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 C9J4A7 227 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PIP5K1CO60331 668 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PTP4A3O75365 173 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 IGHEP01854 428 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SCG5P05408 212 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 TSPAN19P0C672 248 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PEPDP12955 493 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 GP1BBP13224 206 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 HTR3AP46098 478 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 CRYZQ08257 329 aaKnown RBP10.22□□□□□ -0.77
SKA2-204ENST00000578519 MLLT11Q13015 90 aaPredicted RBP10.22□□□□□ -0.77
SKA2-204ENST00000578519 ZNF846Q147U1 533 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 NNATQ16517 81 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 CTF1Q16619 201 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 LCN1P1Q5VSP4 162 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 AADACL4Q5VUY2 407 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SLC30A6Q6NXT4 461 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 C5orf46Q6UWT4 87 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SLC16A12Q6ZSM3 486 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 ANKRD37Q7Z713 158 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SLCO6A1Q86UG4 719 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PRSS58Q8IYP2 241 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 FAM71CQ8NEG0 241 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 OR52I1Q8NGK6 324 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 OR8D4Q8NGM9 314 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PFN4Q8NHR9 129 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 ADOQ96SZ5 270 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SH3GL3Q99963 347 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 ZNF426Q9BUY5 554 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PLA2G12AQ9BZM1 189 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
SKA2-204ENST00000578519 WDR54Q9H977 334 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 HMG20AQ9NP66 347 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PALMDQ9NP74 551 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 CMC2Q9NRP2 79 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 FLRT3Q9NZU0 649 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SSR3Q9UNL2 185 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 SIGLEC7Q9Y286 467 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 EXOGQ9Y2C4 368 aaKnown RBP10.22□□□□□ -0.77
SKA2-204ENST00000578519 PCDHGB7Q9Y5F8 929 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 A3GALT2U3KPV4 340 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 U3KQA8 63 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 CCDC88CQ9P219 2028 aa10.22□□□□□ -0.77
SKA2-204ENST00000578519 ABCA7Q8IZY2 2146 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 OR2W5A6NFC9 320 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 OR6C70A6NIJ9 312 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 VSTM2BA6NLU5 285 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 IDSB3KWA1 339 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 M0R082 166 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 M0R129 80 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 KPNA4O00629 521 aaPredicted RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 NTN3O00634 580 aaPredicted RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 FLRT2O43155 660 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 CDC40O60508 579 aaKnown RBP eCLIP10.21□□□□□ -0.77
SKA2-204ENST00000578519 TSPAN2O60636 221 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 SLC25A12O75746 678 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 ZFAND5O76080 213 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 OR7A10O76100 309 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 PTHP01270 115 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 FUT1P19526 365 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 MAKP20794 623 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 CXCR1P25024 350 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 ITPKBP27987 946 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 SLC1A3P43003 542 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 CCR4P51679 360 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 WNT4P56705 351 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 SLC26A5P58743 744 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 RAB15P59190 212 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 MC2RQ01718 297 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 CBFBQ13951 182 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 TSTQ16762 297 aaKnown RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 ISXQ2M1V0 245 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 ZNF829Q3KNS6 432 aaPredicted RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 PRAMEF17Q5VTA0 474 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 PWWP2BQ6NUJ5 590 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 KIRREL2Q6UWL6 708 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 DPY19L2P2Q6ZN68 376 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 COX15Q7KZN9 410 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 MEPCEQ7L2J0 689 aaKnown RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 CPEB2Q7Z5Q1 589 aaKnown RBP10.21□□□□□ -0.77
SKA2-204ENST00000578519 LAPTM4BQ86VI4 370 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 KLHL36Q8N4N3 616 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 SLC15A4Q8N697 577 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 ZBTB44Q8NCP5 570 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 OR4Q3Q8NH05 313 aa10.21□□□□□ -0.77
SKA2-204ENST00000578519 TMEM234Q8WY98 164 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms