RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 FAM86B1Q8N7N1 296 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 ST6GALNAC3Q8NDV1 305 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 TMEM234Q8WY98 164 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 NPAS1Q99742 590 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 ZNF559Q9BR84 538 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 TRIM15Q9C019 465 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 ADAM19Q9H013 955 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
MKS1-206ENST00000577824 C12orf10Q9HB07 376 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 NPIPA1Q9UND3 350 aa11.49□□□□□ -0.57
MKS1-206ENST00000577824 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 A0A0B4J2E0 115 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 A0A1B0GX12 115 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 GMFGO60234 142 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 SEMA7AO75326 666 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 TRAPPC6AO75865 159 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 WISP1O95388 367 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 ZNF682O95780 498 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 NUDT14O95848 222 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 MAGEA2P43356 314 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 HTR3AP46098 478 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 MAP2K6P52564 334 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 SESN3P58005 492 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 SELENBP1Q13228 472 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 IQCCQ4KMZ1 466 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 RAET1LQ5VY80 246 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 VASNQ6EMK4 673 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 WBP2NLQ6ICG8 309 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 C3orf33Q6P1S2 294 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 AAGABQ6PD74 315 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 ZNF613Q6PF04 617 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 ENPP6Q6UWR7 440 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 PLEKHM3Q6ZWE6 761 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 YRDCQ86U90 279 aaKnown RBP11.48□□□□□ -0.57
MKS1-206ENST00000577824 MIB2Q96AX9 1013 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 C3orf49Q96BT1 292 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 TRIM2Q9C040 744 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 PRDM14Q9GZV8 571 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 DEFB127Q9H1M4 99 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 SPRR3Q9UBC9 169 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 ACAD8Q9UKU7 415 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 ZNF835Q9Y2P0 537 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 SH3GLB1Q9Y371 365 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 HEATR5AQ86XA9 2040 aa11.48□□□□□ -0.57
MKS1-206ENST00000577824 TCRBV3S1A0A5B6 114 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 PRKD3O94806 890 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 ZNF708P17019 499 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 HOXB6P17509 224 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 TNFRSF1BP20333 461 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 RYKP34925 604 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 APOBEC1P41238 236 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 IDH2P48735 452 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 LHX2P50458 406 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 POLR2HP52434 150 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 COPZ1P61923 177 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 FOXK1P85037 733 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 HOXC5Q00444 222 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 FLOT2Q14254 428 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 TOMM20Q15388 145 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 CYP2R1Q6VVX0 501 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 Q6ZPB1 254 aaPredicted RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 TSEN54Q7Z6J9 526 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 ATG4DQ86TL0 474 aaPredicted RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 RBM45Q8IUH3 476 aaKnown RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 ZNF563Q8TA94 476 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 DNAJA4Q8WW22 397 aaPredicted RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 PYURFQ96I23 114 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 TPD52L3Q96J77 140 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 PRRC1Q96M27 445 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 SFXN2Q96NB2 322 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 UGT2B28Q9BY64 529 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 OSGIN1Q9UJX0 560 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
MKS1-206ENST00000577824 AP4B1Q9Y6B7 739 aa11.47□□□□□ -0.57
MKS1-206ENST00000577824 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.57
MKS1-206ENST00000577824 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 A0A1B0GTH9 108 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 SHISA8B8ZZ34 492 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 BCKDKO14874 412 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 ZNF208O43345 1280 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 CHP2O43745 196 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 EFNA2O43921 213 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 FZD7O75084 574 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 PRSS23O95084 383 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 OR5F1O95221 314 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 LYPD3O95274 346 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 STAMBPO95630 424 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 IFNW1P05000 195 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 THRBP10828 461 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 GP1BBP13224 206 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 CPN1P15169 458 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 BMP7P18075 431 aa11.46□□□□□ -0.57
MKS1-206ENST00000577824 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms