RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 BMP5P22003 454 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 SELENBP1Q13228 472 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 PON3Q15166 354 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 ADRM1Q16186 407 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 SGCBQ16585 318 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 ZSWIM7Q19AV6 140 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 FBXL19-AS1Q494R0 122 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 LIN52Q52LA3 116 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 GCNT6Q5T4J0 391 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 RNF220Q5VTB9 566 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 ZNF836Q6ZNA1 936 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 PLEKHM3Q6ZWE6 761 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 OR2V1Q8NHB1 315 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 BBS10Q8TAM1 723 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 FNDC9Q8TBE3 224 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 INTS12Q96CB8 462 aaKnown RBP17.35■□□□□ 0.37
SS18-208ENST00000577751 SPOCK3Q9BQ16 436 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 SFXN3Q9BWM7 321 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 RNF122Q9H9V4 155 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 RLIMQ9NVW2 624 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 JKAMPQ9P055 326 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 PRDM4Q9UKN5 801 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 ZNF232Q9UNY5 417 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 ZNF443Q9Y2A4 671 aaPredicted RBP17.35■□□□□ 0.37
SS18-208ENST00000577751 IFT52Q9Y366 437 aa17.35■□□□□ 0.37
SS18-208ENST00000577751 GJE1A6NN92 205 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 BBIP1A8MTZ0 92 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 TNFSF11O14788 317 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 CXCL13O43927 109 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 CRHP06850 196 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 PABPC4LP0CB38 370 aaKnown RBP17.34■□□□□ 0.37
SS18-208ENST00000577751 ETS2P15036 469 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 LSP1P33241 339 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 RYKP34925 604 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 EIF1AXP47813 144 aaKnown RBP17.34■□□□□ 0.37
SS18-208ENST00000577751 AGFG1P52594 562 aaKnown RBP17.34■□□□□ 0.37
SS18-208ENST00000577751 CDK6Q00534 326 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 SELPLGQ14242 412 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 LARS2Q15031 903 aaKnown RBP17.34■□□□□ 0.37
SS18-208ENST00000577751 MAPRE2Q15555 327 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 EEF1A1P5Q5VTE0 462 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 OR2A2Q6IF42 318 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 P4HA3Q7Z4N8 544 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 NFKBIDQ8NI38 313 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 ZNF563Q8TA94 476 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 ELAC2Q9BQ52 826 aaKnown RBP17.34■□□□□ 0.37
SS18-208ENST00000577751 CCDC106Q9BWC9 280 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 TRIM8Q9BZR9 551 aa17.34■□□□□ 0.37
SS18-208ENST00000577751 C5orf58C9J3I9 102 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 AP3D1O14617 1153 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 TNFSF13O75888 250 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 NPPAP01160 153 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 SFTPDP35247 375 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 APOBEC1P41238 236 aaKnown RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 IDH2P48735 452 aaKnown RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 GYS2P54840 703 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 MTPNP58546 118 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 EPS8Q12929 822 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 TRMT5Q32P41 509 aaKnown RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 TMEM176BQ3YBM2 270 aaPredicted RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 PDSS1Q5T2R2 415 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 HBMQ6B0K9 141 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 REEP3Q6NUK4 255 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 GRINAQ7Z429 371 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 SPATA21Q7Z572 469 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 ZNF440Q8IYI8 595 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 GCNT2Q8N0V5 402 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 CLIP4Q8N3C7 705 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 OSTF1Q92882 214 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 SPATA9Q9BWV2 254 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 RSPO3Q9BXY4 272 aaPredicted RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 KAT8Q9H7Z6 458 aaKnown RBP17.33■□□□□ 0.36
SS18-208ENST00000577751 CAPN7Q9Y6W3 813 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 ADGRG4Q8IZF6 3080 aa17.33■□□□□ 0.36
SS18-208ENST00000577751 LOC100653049A0A140TA62 436 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 A0A1W2PNV4 684 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 GMNCA6NCL1 334 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 CFAP73A6NFT4 308 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 FXYD1O00168 92 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 SYT5O00445 386 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 CCDC22O60826 627 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 KRT34O76011 436 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 AQP8O94778 261 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 FCGR2AP12318 317 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 COX6B1P14854 86 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 DRD4P21917 467 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 SLC6A2P23975 617 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 ACAA2P42765 397 aaKnown RBP17.32■□□□□ 0.36
SS18-208ENST00000577751 ASCL1P50553 236 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 CARD18P57730 90 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 MERTKQ12866 999 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 SCARB2Q14108 478 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 CAPRIN1Q14444 709 aaKnown RBP17.32■□□□□ 0.36
SS18-208ENST00000577751 GUSBP1Q15486 140 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 ZNF311Q5JNZ3 666 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 REP15Q6BDI9 236 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 NANOGP8Q6NSW7 305 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 C3orf33Q6P1S2 294 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 NET1Q7Z628 596 aaPredicted RBP17.32■□□□□ 0.36
SS18-208ENST00000577751 SNX32Q86XE0 403 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms