RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CBLN3Q6UW01 205 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 B3GLCTQ6Y288 498 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 TMPPEQ6ZT21 453 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 ZAR1Q86SH2 424 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 RELL1Q8IUW5 271 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 CNPY4Q8N129 248 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 C1orf162Q8NEQ5 155 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 SLC25A43Q8WUT9 341 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 JADE3Q92613 823 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 C3orf49Q96BT1 292 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 PPCDCQ96CD2 204 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 GIMAP5Q96F15 307 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 CHMP6Q96FZ7 201 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 TMEM237Q96Q45 408 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 OR5B2Q96R09 309 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 PAFAH2Q99487 392 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 PIGUQ9H490 435 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 MID1IP1Q9NPA3 183 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 PARPBPQ9NWS1 579 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 MALT1Q9UDY8 824 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 AMDHD2Q9Y303 409 aa7.9□□□□□ -1.14
SMG6-218ENST00000575454 SPIN1Q9Y657 262 aaPredicted RBP7.9□□□□□ -1.14
SMG6-218ENST00000575454 B9A039 149 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 TRIM49D1C9J1S8 452 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 SULT2B1O00204 365 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 DNPH1O43598 174 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 SNUPNO95149 360 aaKnown RBP7.89□□□□□ -1.15
SMG6-218ENST00000575454 WNT11O96014 354 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 GSTA1P08263 222 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 ITGA2P17301 1181 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 SERPINF1P36955 418 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
SMG6-218ENST00000575454 DIO1P49895 249 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 CHN2P52757 468 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 ATP12AP54707 1039 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 MLC1Q15049 377 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 QPRTQ15274 297 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 GABRA6Q16445 453 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 CCNJQ5T5M9 372 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 ABLIM2Q6H8Q1 611 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 FBXO30Q8TB52 745 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 PIGXQ8TBF5 258 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 DCAKDQ8WVC6 231 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 TMEM234Q8WY98 164 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 ST8SIA1Q92185 356 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 CCDC126Q96EE4 140 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 FBXO17Q96EF6 278 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 L3HYPDHQ96EM0 354 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 ZNF300Q96RE9 604 aaPredicted RBP7.89□□□□□ -1.15
SMG6-218ENST00000575454 KLHDC3Q9BQ90 382 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 REEP4Q9H6H4 257 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 NINJ2Q9NZG7 142 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 DCTN4Q9UJW0 460 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 DTNAQ9Y4J8 743 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 PCDHB14Q9Y5E9 798 aa7.89□□□□□ -1.15
SMG6-218ENST00000575454 FREM3P0C091 2139 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 VSTM5A8MXK1 200 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 SLC28A1O00337 649 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 ANKRD28O15084 1053 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 ZNF264O43296 627 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 SEC22BO75396 215 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 LY6HO94772 140 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 IGHV3-9P01782 118 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 HMGN2P05204 90 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 UBL4AP11441 157 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 EDNRAP25101 427 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 FRKP42685 505 aaPredicted RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 CLK1P49759 484 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 PRPS1P60891 318 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 TOMM34Q15785 309 aaPredicted RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 MST1LQ2TV78 715 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 TIGD2Q4W5G0 525 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 EXOSC6Q5RKV6 272 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 KLHL24Q6TFL4 600 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 TIFABQ6ZNK6 161 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 R3HCC1LQ7Z5L2 792 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 TMCO5AQ8N6Q1 288 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 C3orf56Q8N813 242 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 ADAMTS15Q8TE58 950 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 CIDECQ96AQ7 238 aaPredicted RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 MTERF3Q96E29 417 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 C1orf159Q96HA4 380 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 SORCS2Q96PQ0 1159 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 KCNA7Q96RP8 456 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 CCT7Q99832 543 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 VRK1Q99986 396 aaPredicted RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 KCNS3Q9BQ31 491 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 C1QTNF6Q9BXI9 259 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 RAB1BQ9H0U4 201 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 OCEL1Q9H607 264 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms