RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 POC1BQ8TC44 478 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 SLC26A7Q8TE54 656 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 NPAS1Q99742 590 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 TM9SF2Q99805 663 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 HOPXQ9BPY8 73 aaPredicted RBP13.71□□□□□ -0.21
LITAF-217ENST00000575426 PAQR5Q9NXK6 330 aaPredicted RBP13.71□□□□□ -0.21
LITAF-217ENST00000575426 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 RNF6Q9Y252 685 aa13.71□□□□□ -0.21
LITAF-217ENST00000575426 CACNA1CQ13936 2221 aa13.71□□□□□ -0.22
LITAF-217ENST00000575426 LRRK2Q5S007 2527 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 A1L4Q6 167 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 FXYD1O00168 92 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 CLDN14O95500 239 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 OPN1LWP04000 364 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 PSMA4P25789 261 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 AQP1P29972 269 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 PRKAR1BP31321 381 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 SFTPDP35247 375 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 APOBEC1P41238 236 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 HTR3AP46098 478 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 EIF1AXP47813 144 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 NUDT2P50583 147 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 SUCLG1P53597 346 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 CLDN15P56746 228 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 CLDN20P56880 219 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 EEF1A1P68104 462 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 ERICH5Q6P6B1 374 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 POMZP3Q6PJE2 187 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 CCDC71Q8IV32 467 aaPredicted RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 ZZZ3Q8IYH5 903 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 WNT2BQ93097 391 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 KLHL15Q96M94 604 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 UCN2Q96RP3 112 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 PINK1Q9BXM7 581 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 PRRG4Q9BZD6 226 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 RLIMQ9NVW2 624 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 INTS1Q8N201 2190 aaKnown RBP13.7□□□□□ -0.22
LITAF-217ENST00000575426 ICE1Q9Y2F5 2266 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 MPDZO75970 2070 aa13.7□□□□□ -0.22
LITAF-217ENST00000575426 A0A0G2JNJ9 132 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 FAAHO00519 579 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 NDUFAB1O14561 156 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 TNFSF11O14788 317 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 SHOX2O60902 331 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 SYNGR4O95473 234 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 GKN3PP0CG01 181 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 SLC7A1P30825 629 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 PCGF2P35227 344 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 EPS8Q12929 822 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 VMACQ2NL98 169 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 TMEM176BQ3YBM2 270 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 HBMQ6B0K9 141 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 DHRS4L2Q6PKH6 230 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 HACD2Q6Y1H2 254 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 PLEKHM3Q6ZWE6 761 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 TNIP2Q8NFZ5 429 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 ZFP3Q96NJ6 502 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 PSMG3-AS1Q96PY0 264 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 Q9UFV3 132 aa13.69□□□□□ -0.22
LITAF-217ENST00000575426 MCTS1Q9ULC4 181 aaKnown RBP13.69□□□□□ -0.22
LITAF-217ENST00000575426 A0A0J9YW62 118 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 SLC22A20A6NK97 555 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 KDM4EB2RXH2 506 aaPredicted RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 H0YC42 278 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 M0QX08 132 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 ETV2O00321 342 aaPredicted RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 AP3D1O14617 1153 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 NTN1O95631 604 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 IL11P20809 199 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 CEACAM8P31997 349 aaPredicted RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 SLC1A3P43003 542 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 GZMMP51124 257 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 TPD52P55327 224 aaPredicted RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 CARD18P57730 90 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 ADGRE4PQ86SQ3 457 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 GGNQ86UU5 652 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms