RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SGCBQ16585 318 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ACSF3Q4G176 576 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 NSUN5P2Q63ZY6 315 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 C3orf33Q6P1S2 294 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 DHRS4L2Q6PKH6 230 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 GRINAQ7Z429 371 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 CALHM3Q86XJ0 350 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZZZ3Q8IYH5 903 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 LILRA2Q8N149 483 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF808Q8N4W9 903 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 TNIP2Q8NFZ5 429 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 OR2T12Q8NG77 320 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ASB5Q8WWX0 329 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 TRIB1Q96RU8 372 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 PINK1Q9BXM7 581 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ACER3Q9NUN7 267 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 RLIMQ9NVW2 624 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
TRAPPC1-206ENST00000573989 ELOVL7A1L3X0 281 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 WIPF3A6NGB9 483 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 HSPB2A8KAH6 182 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 M0QX08 132 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 EIF1AYO14602 144 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZG16O60844 167 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 PSMA4P25789 261 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC7A1P30825 629 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 TIMP3P35625 211 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC1A3P43003 542 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 GZMMP51124 257 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 MAP2K6P52564 334 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC7A2P52569 658 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 PCBP3P57721 371 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 NCALDP61601 193 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 HSPB2Q16082 182 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 RTL6Q6ICC9 239 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 WBP2NLQ6ICG8 309 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 C16orf89Q6UX73 402 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 P4HA3Q7Z4N8 544 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLIP4Q8N3C7 705 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 POC1BQ8TC44 478 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC25A43Q8WUT9 341 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 KLHL15Q96M94 604 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZFP3Q96NJ6 502 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 TM9SF2Q99805 663 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 TUBA1CQ9BQE3 449 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SPAG4Q9NPE6 437 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 RPS6KB2Q9UBS0 482 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 TENM4Q6N022 2769 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 DOCK7Q96N67 2140 aa11.51□□□□□ -0.57
TRAPPC1-206ENST00000573989 SPTBN1Q01082 2364 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLCA1A8K7I4 914 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 GSTA4O15217 222 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 BCAS1O75363 584 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 GMNNO75496 209 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 MFN2O95140 757 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 NTN1O95631 604 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 C8BP07358 591 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 GKN3PP0CG01 181 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 GLI4P10075 376 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 FCGR2AP12318 317 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CHRNB4P30926 498 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 SFTPDP35247 375 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 EIF1AXP47813 144 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 POLR2HP52434 150 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 DLX5P56178 289 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLDN15P56746 228 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLDN20P56880 219 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 NUP107P57740 925 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 PSME3P61289 254 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 LIPEQ05469 1076 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 OR2A2Q6IF42 318 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 POMZP3Q6PJE2 187 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 PLEKHM3Q6ZWE6 761 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CCDC80Q76M96 950 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC15A3Q8IY34 581 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 MICU2Q8IYU8 434 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 OR2V1Q8NHB1 315 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CA5BP1Q8WTZ4 195 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 WNT2BQ93097 391 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 PRRG4Q9BZD6 226 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 ALG2Q9H553 416 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 TMEM185BQ9H7F4 350 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CMTM6Q9NX76 183 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 SELENONQ9NZV5 590 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 CHRNA9Q9UGM1 479 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 MCTS1Q9ULC4 181 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms