RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PAQR7Q86WK9 346 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 NUDT13Q86X67 352 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 METTL4Q8N3J2 472 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 LIX1Q8N485 282 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 MFSD9Q8NBP5 474 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 OR4E2Q8NGC2 313 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 POP5Q969H6 163 aaKnown RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 EME1Q96AY2 570 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 RCN3Q96D15 328 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 C11orf24Q96F05 449 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-222ENST00000570139 MARK4Q96L34 752 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 APOLD1Q96LR9 279 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 PRAP1Q96NZ9 151 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 SH3GL1Q99961 368 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 DPH7Q9BTV6 452 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 CACNG6Q9BXT2 260 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 MS4A8Q9BY19 250 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 NLNQ9BYT8 704 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ABCG4Q9H172 646 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 CLMPQ9H6B4 373 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 XKR8Q9H6D3 395 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 NLGN3Q9NZ94 848 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 EPHA6Q9UF33 1036 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 POMT2Q9UKY4 750 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 ANKRD12Q6UB98 2062 aa6.51□□□□□ -1.37
CNOT1-222ENST00000570139 KMT2EQ8IZD2 1858 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 IGKV1-8A0A0C4DH67 115 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 RNF103-CHMP3A0A140T963 221 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 LOC100653049A0A140TA62 436 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 A0A1B0GTQ1 180 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 GNG14A0A1W2PPG7 69 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 OR6C74A6NCV1 312 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 BTN3A3O00478 584 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 HS3ST1O14792 307 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 AIM2O14862 343 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 WNT9BO14905 357 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ANKRD28O15084 1053 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 OR1F1O43749 312 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TBX19O60806 448 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 KRT34O76011 436 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 KCNK5O95279 499 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 STAMBPO95630 424 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ANXA4P09525 319 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 RAB40ALP0C0E4 278 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 UGT2B7P16662 529 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ITIH1P19827 911 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 PSMB5P28074 263 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 PEBP1P30086 187 aaKnown RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 PLA2G5P39877 138 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 EIF2S3P41091 472 aaKnown RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 MTTPP55157 894 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 RIPK1Q13546 671 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 PTGR1Q14914 329 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 HEPACAMQ14CZ8 416 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 CLPPQ16740 277 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF542PQ5EBM4 170 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TOR1AIP1Q5JTV8 583 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 SAMD4BQ5PRF9 694 aaKnown RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 WASHC2DQ5SRD0 308 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ANXA8L1Q5VT79 327 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 WDR73Q6P4I2 378 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TRIM40Q6P9F5 258 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 KCTD9Q7L273 389 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 COMMD6Q7Z4G1 85 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 NET1Q7Z628 596 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 GPR180Q86V85 440 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 FUNDC1Q8IVP5 155 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 DEFB107AQ8IZN7 70 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ARL14Q8N4G2 192 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 DEFB119Q8N690 84 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 C1orf52Q8N6N3 182 aaKnown RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TMEM105Q8N8V8 129 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ZBTB44Q8NCP5 570 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 OR8J2Q8NGG1 315 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 NT5CQ8TCD5 201 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 SLC13A3Q8WWT9 602 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 RERGQ96A58 199 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 MUS81Q96NY9 551 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 HBEGFQ99075 208 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 SLX1AQ9BQ83 275 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TBCDQ9BTW9 1192 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ZNF350Q9GZX5 532 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 TCEAL2Q9H3H9 227 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 FN3KQ9H479 309 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 WDR41Q9HAD4 459 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 MYNNQ9NPC7 610 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 HRASLS2Q9NWW9 162 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 ASB6Q9NWX5 421 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 FAM120CQ9NX05 1096 aaKnown RBP6.5□□□□□ -1.37
CNOT1-222ENST00000570139 SPHK1Q9NYA1 384 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 KLHL13Q9P2N7 655 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
CNOT1-222ENST00000570139 THADAQ6YHU6 1953 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 COL6A3P12111 3177 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 PCM1Q15154 2024 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 A0A1B0GVT2 93 aa6.49□□□□□ -1.37
CNOT1-222ENST00000570139 TLCD2A6NGC4 264 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms