RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GKN3PP0CG01 181 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 PIPP12273 146 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 PRG2P13727 222 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 TBXA2RP21731 343 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 TSPAN7P41732 249 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 EMP2P54851 167 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 CTBP2P56545 445 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 PRKCDQ05655 676 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 RAB39AQ14964 217 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 NEDD8Q15843 81 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 OCLNQ16625 522 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 MRGPREQ86SM8 312 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SLC34A3Q8N130 599 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 FAM71CQ8NEG0 241 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 OR13F1Q8NGS4 319 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 DNAJA4Q8WW22 397 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 MUL1Q969V5 352 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SLC38A2Q96QD8 506 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 MYCBPQ99417 103 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 MED17Q9NVC6 651 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 PAK1IP1Q9NWT1 392 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-221ENST00000567935 RPS6KB2Q9UBS0 482 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 MED31Q9Y3C7 131 aa13.42□□□□□ -0.26
COMMD4-221ENST00000567935 A0A1W2PQD3 144 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 SAGE2PA6NJ88 616 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 IDSB3KWA1 339 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 SOX14O95416 240 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 HMGN1P05114 100 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 CD63P08962 238 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 PCMT1P22061 227 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 DCKP27707 260 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ACAA2P42765 397 aaKnown RBP13.41□□□□□ -0.26
COMMD4-221ENST00000567935 PCYT1AP49585 367 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 GPR143P51810 404 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 COPZ1P61923 177 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 HOXC5Q00444 222 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 PLAURQ03405 335 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 FOXD4Q12950 439 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-221ENST00000567935 PMS2P3Q13401 168 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 GINS1Q14691 196 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 GTF2IRD2BQ6EKJ0 949 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ULK3Q6PHR2 472 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 B3GNT6Q6ZMB0 384 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ANKRD37Q7Z713 158 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 GTF2IRD2Q86UP8 949 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 CCDC103Q8IW40 242 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 NRMQ8IXM6 262 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 CYP4Z2PQ8N1L4 340 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 FAM26EQ8N5C1 309 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 BMPERQ8N8U9 685 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF441Q8N8Z8 693 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 B3GNT7Q8NFL0 401 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 TMEM255BQ8WV15 326 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 RORBQ92753 470 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
COMMD4-221ENST00000567935 BCL7BQ9BQE9 202 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 COPS4Q9BT78 406 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF426Q9BUY5 554 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 PRR14Q9BWN1 585 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 YIPF3Q9GZM5 350 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 CCDC90BQ9GZT6 254 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 WWTR1Q9GZV5 400 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 IL20Q9NYY1 176 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-221ENST00000567935 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
COMMD4-221ENST00000567935 A0A1B0GWA3 101 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF99A8MXY4 864 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 H3BSA7 217 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 M0R3G1 203 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 MEN1O00255 615 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 RCBTB2O95199 551 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 UTS2O95399 124 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 TIAF1O95411 115 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 IGF2P01344 180 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 CDK1P06493 297 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 KLK3P07288 261 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 IL12BP29460 328 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 SLC6A8P48029 635 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 PNLIPRP2P54317 469 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 TMBIM6P55061 237 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 NRG3P56975 720 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 E2F1Q01094 437 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-221ENST00000567935 NNATQ16517 81 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 FNDC7Q5VTL7 733 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 CDCP2Q5VXM1 449 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 ZNF620Q6ZNG0 422 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 LAPTM4BQ86VI4 370 aa13.4□□□□□ -0.26
COMMD4-221ENST00000567935 CLVS1Q8IUQ0 354 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms