RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 FIG4Q92562 907 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 ZFP3Q96NJ6 502 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 TRIM8Q9BZR9 551 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 RLIMQ9NVW2 624 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 ZNF232Q9UNY5 417 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 ZNF443Q9Y2A4 671 aaPredicted RBP19.45■□□□□ 0.7
NME3-210ENST00000567271 IFT52Q9Y366 437 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 ZNF175Q9Y473 711 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 DOCK7Q96N67 2140 aa19.45■□□□□ 0.7
NME3-210ENST00000567271 A0A0J9YW62 118 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 DVL2O14641 736 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 TMIGD3P0DMS9 266 aaPredicted RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 SHC1P29353 583 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 EIF1AXP47813 144 aaKnown RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 GNGT1P63211 74 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 FOXF2Q12947 444 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 CYLC2Q14093 348 aaPredicted RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 LARS2Q15031 903 aaKnown RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 SGCBQ16585 318 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 ZSWIM7Q19AV6 140 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 TRMT5Q32P41 509 aaKnown RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 MMEL1Q495T6 779 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 RNF220Q5VTB9 566 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 REP15Q6BDI9 236 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 P4HA3Q7Z4N8 544 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 OR10D3Q8NH80 312 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 OR2V1Q8NHB1 315 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 ZNF563Q8TA94 476 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 KLHL15Q96M94 604 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 FAM107BQ9H098 131 aa19.44■□□□□ 0.7
NME3-210ENST00000567271 NSRP1Q9H0G5 558 aaKnown RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 PAQR5Q9NXK6 330 aaPredicted RBP19.44■□□□□ 0.7
NME3-210ENST00000567271 AP3D1O14617 1153 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 TNFSF11O14788 317 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 MRASO14807 208 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 IL18BPO95998 194 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 NPPAP01160 153 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 PABPC4LP0CB38 370 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 ETS2P15036 469 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 BMP5P22003 454 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 IDH2P48735 452 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 MERTKQ12866 999 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 SELENBP1Q13228 472 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 SCARB2Q14108 478 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 PON3Q15166 354 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 ZNF311Q5JNZ3 666 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 PDSS1Q5T2R2 415 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 ZNF787Q6DD87 383 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 NANOGP8Q6NSW7 305 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 PLEKHM3Q6ZWE6 761 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 CPLX4Q7Z7G2 160 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 MTDHQ86UE4 582 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 CLIP4Q8N3C7 705 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 RELL2Q8NC24 303 aaPredicted RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 FNDC9Q8TBE3 224 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 INTS12Q96CB8 462 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 LRRC58Q96CX6 371 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 SPATA9Q9BWV2 254 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 KAT8Q9H7Z6 458 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 NANOGQ9H9S0 305 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 CACYBPQ9HB71 228 aaKnown RBP19.43■□□□□ 0.7
NME3-210ENST00000567271 CHST2Q9Y4C5 530 aa19.43■□□□□ 0.7
NME3-210ENST00000567271 CFAP73A6NFT4 308 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 GJE1A6NN92 205 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 FAAHO00519 579 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 CXCL13O43927 109 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 SNX3O60493 162 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 SLC6A2P23975 617 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 SFTPDP35247 375 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 OPRM1P35372 400 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 APOBEC1P41238 236 aaKnown RBP19.42■□□□□ 0.7
NME3-210ENST00000567271 AGFG1P52594 562 aaKnown RBP19.42■□□□□ 0.7
NME3-210ENST00000567271 EPS8Q12929 822 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 TMEM176BQ3YBM2 270 aaPredicted RBP19.42■□□□□ 0.7
NME3-210ENST00000567271 HBMQ6B0K9 141 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 OR2A2Q6IF42 318 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 PTOV1Q86YD1 416 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 ZNF440Q8IYI8 595 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 GCNT2Q8N0V5 402 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 ATP6V1C2Q8NEY4 427 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 RP9Q8TA86 221 aaKnown RBP19.42■□□□□ 0.7
NME3-210ENST00000567271 OSTF1Q92882 214 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 CCDC106Q9BWC9 280 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 SFXN3Q9BWM7 321 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 NPDC1Q9NQX5 325 aaPredicted RBP19.42■□□□□ 0.7
NME3-210ENST00000567271 UNC79Q9P2D8 2635 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 ADGRG4Q8IZF6 3080 aa19.42■□□□□ 0.7
NME3-210ENST00000567271 CENPEQ02224 2701 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 FXYD1O00168 92 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 CARD18P57730 90 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 RBBP4Q09028 425 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 CYP51A1Q16850 503 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 C3orf33Q6P1S2 294 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 GRINAQ7Z429 371 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 NET1Q7Z628 596 aaPredicted RBP19.41■□□□□ 0.7
NME3-210ENST00000567271 SERPINA11Q86U17 422 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 MED12LQ86YW9 2145 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 PCYOX1LQ8NBM8 494 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 ACBD4Q8NC06 268 aa19.41■□□□□ 0.7
NME3-210ENST00000567271 HIPK4Q8NE63 616 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms