RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RASGEF1BQ0VAM2 473 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 HSPB3Q12988 150 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 KIAA0040Q15053 153 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 RASA2Q15283 850 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
SF3B3-204ENST00000563739 KLHL26Q53HC5 615 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 HIST2H2BDQ6DRA6 164 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 KLC3Q6P597 504 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 BHLHB9Q6PI77 547 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 GPRIN3Q6ZVF9 776 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 SLC43A2Q8N370 569 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 OR52E4Q8NGH9 312 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 CDC26Q8NHZ8 85 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 MUCL1Q96DR8 90 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 FCRL1Q96LA6 429 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 MUS81Q96NY9 551 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 QRSL1Q9H0R6 528 aaKnown RBP9.04□□□□□ -0.96
SF3B3-204ENST00000563739 MRPL46Q9H2W6 279 aaKnown RBP9.04□□□□□ -0.96
SF3B3-204ENST00000563739 GSTO2Q9H4Y5 243 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 SEC61A2Q9H9S3 476 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 KCNE5Q9UJ90 142 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 TMCO1Q9UM00 188 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 CARD8Q9Y2G2 431 aa9.04□□□□□ -0.96
SF3B3-204ENST00000563739 TTC36A6NLP5 189 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 SMIM24O75264 130 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 BCAS1O75363 584 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 KRT6AP02538 564 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 KRT6BP04259 564 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 HNF1AP20823 631 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 GIFP27352 417 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 NTSP30990 170 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 APOBEC3AP31941 199 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 EIF1P41567 113 aaKnown RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ASMTP46597 345 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 KRT6CP48668 564 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 CDH15P55291 814 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 SELENBP1Q13228 472 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 PDE7AQ13946 482 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 TRIP10Q15642 601 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ZNHIT3Q15649 155 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 BEND6Q5SZJ8 279 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 FBXW9Q5XUX1 488 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 C1orf229Q6ZS94 237 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 MISPQ8IVT2 679 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 CDRT4Q8N9R6 151 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ATP6V1C2Q8NEY4 427 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 NUP43Q8NFH3 380 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 OR6Y1Q8NGX8 325 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 AENQ8WTP8 325 aaKnown RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 DCAKDQ8WVC6 231 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF764Q96H86 408 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 MS4A4EQ96PG1 132 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 MRPL57Q9BQC6 102 aaKnown RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 C12orf65Q9H3J6 166 aaKnown RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 SLC17A5Q9NRA2 495 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 UBQLN4Q9NRR5 601 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 NMRK1Q9NWW6 199 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 GIN1Q9NXP7 522 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ZNF180Q9UJW8 692 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 MRTO4Q9UKD2 239 aaKnown RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 POU2F3Q9UKI9 436 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 PTGDR2Q9Y5Y4 395 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 GPC6Q9Y625 555 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-204ENST00000563739 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
SF3B3-204ENST00000563739 LOC390937A0A1W2PQ73 354 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 POC1B-GALNT4F8VUJ3 575 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 ULK1O75385 1050 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 STAMBPO95630 424 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 EFNA1P20827 205 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-204ENST00000563739 GCAP28676 217 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 LCN1P31025 176 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 GSTM5P46439 218 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 SERPINB9P50453 376 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 P2RX1P51575 399 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 ARFIP2P53365 341 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 SUMO3P55854 103 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-204ENST00000563739 QPRTQ15274 297 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 ADIPOQQ15848 244 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 EMBQ6PCB8 327 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 OLIG3Q7RTU3 272 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 GALNT5Q7Z7M9 940 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 MYPOPQ86VE0 399 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-204ENST00000563739 METTL6Q8TCB7 284 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 ZFAND2BQ8WV99 257 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 UBLCP1Q8WVY7 318 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-204ENST00000563739 CDS1Q92903 461 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 FBXO17Q96EF6 278 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 SERHL2Q9H4I8 314 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 C3orf14Q9HBI5 128 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 TAS2R16Q9NYV7 291 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 TMEM216Q9P0N5 145 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 TMEFF2Q9UIK5 374 aaPredicted RBP9.02□□□□□ -0.97
SF3B3-204ENST00000563739 MOKQ9UQ07 419 aa9.02□□□□□ -0.97
SF3B3-204ENST00000563739 IGHV1-18A0A0C4DH31 117 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PDPK1O15530 556 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 TBX19O60806 448 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms