RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 UBQLNLQ8IYU4 475 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 TMCO5AQ8N6Q1 288 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 POU5F2Q8N7G0 328 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ACBD4Q8NC06 268 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 RELL2Q8NC24 303 aaPredicted RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 OR10Q1Q8NGQ4 319 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 NFKBIDQ8NI38 313 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 BBS10Q8TAM1 723 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ASB5Q8WWX0 329 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ST8SIA1Q92185 356 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 SMPDL3BQ92485 455 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 FIG4Q92562 907 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 WNT2BQ93097 391 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 LRRC58Q96CX6 371 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 MRGPRX4Q96LA9 322 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 FAM107BQ9H098 131 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 TMEM185BQ9H7F4 350 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 NANOGQ9H9S0 305 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ACER3Q9NUN7 267 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 MRGBPQ9NV56 204 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 COQ3Q9NZJ6 369 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CALML5Q9NZT1 146 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ZNF443Q9Y2A4 671 aaPredicted RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 CAPN7Q9Y6W3 813 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ITPR2Q14571 2701 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 NKX2-6A6NCS4 301 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 HSPB2A8KAH6 182 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 BBIP1A8MTZ0 92 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 EVPLLA8MZ36 301 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 FAM47E-STBD1D6RA91 191 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PRSS44E7EML9 344 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 FAAHO00519 579 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 MRASO14807 208 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 TPST1O60507 370 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CCDC22O60826 627 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 RCBTB2O95199 551 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 NUDT14O95848 222 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 NPPAP01160 153 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PABPC4LP0CB38 370 aaKnown RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 GKN3PP0CG01 181 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 COX4I1P13073 169 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PRG2P13727 222 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 ETS2P15036 469 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 IL7RP16871 459 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PGCP20142 388 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 ELK4P28324 431 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 RYKP34925 604 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CRYBA2P53672 197 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PCBP3P57721 371 aaKnown RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 EPS8Q12929 822 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CYLC2Q14093 348 aaPredicted RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 SCARB2Q14108 478 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 GNA13Q14344 377 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 SF3B4Q15427 424 aaKnown RBP eCLIP7.67□□□□□ -1.182e-6■■■■□ 21.1
UBR1-204ENST00000563239 GUSBP1Q15486 140 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 HSPB2Q16082 182 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 LIN52Q52LA3 116 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 RNF220Q5VTB9 566 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 SP5Q6BEB4 398 aaPredicted RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 REEP3Q6NUK4 255 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 C8orf82Q6P1X6 216 aaPredicted RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 PEX5LQ8IYB4 626 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 LILRA2Q8N149 483 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 MEIOBQ8N635 442 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 OR10D3Q8NH80 312 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 OR2V1Q8NHB1 315 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 RP9Q8TA86 221 aaKnown RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 FNDC9Q8TBE3 224 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CA5BP1Q8WTZ4 195 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 RCN3Q96D15 328 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 WFDC6Q9BQY6 131 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 GPATCH1Q9BRR8 931 aaKnown RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 SPATA9Q9BWV2 254 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 PINK1Q9BXM7 581 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 COQ10BQ9H8M1 238 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 NPDC1Q9NQX5 325 aaPredicted RBP7.67□□□□□ -1.18
UBR1-204ENST00000563239 USP22Q9UPT9 525 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CORO2BQ9UQ03 480 aa7.67□□□□□ -1.18
UBR1-204ENST00000563239 CFAP73A6NFT4 308 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 SLC22A20A6NK97 555 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 FAM90A27PA6NNH2 459 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 C5orf58C9J3I9 102 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 TNFSF11O14788 317 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 FRS3O43559 492 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CXCL13O43927 109 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 TNFSF13O75888 250 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 AQP8O94778 261 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 MFN2O95140 757 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 IL2RAP01589 272 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 IGFBP2P18065 325 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 KLK2P20151 261 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 SLC6A2P23975 617 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 CTSSP25774 331 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 PRKAR1BP31321 381 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 SFTPDP35247 375 aa7.66□□□□□ -1.18
UBR1-204ENST00000563239 IDH2P48735 452 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 AGFG1P52594 562 aaKnown RBP7.66□□□□□ -1.18
UBR1-204ENST00000563239 RIPPLY3P57055 190 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms