RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 DOPEY2Q9Y3R5 2298 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 USP9YO00507 2555 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CDHR4A6H8M9 788 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CD8B2A6NJW9 211 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 KDM4EB2RXH2 506 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GTPBP1O00178 669 aaKnown RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 MRASO14807 208 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 EFNA2O43921 213 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GMFGO60234 142 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 SHOX2O60902 331 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 UBTFL6P0CB48 400 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GLI4P10075 376 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 PEPDP12955 493 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 ETS2P15036 469 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 IL7RP16871 459 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 ELK4P28324 431 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 TIMP3P35625 211 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 EIF1P41567 113 aaKnown RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GSK3AP49840 483 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF41P51814 821 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 SUCLG1P53597 346 aaKnown RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 NUP107P57740 925 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 MTPNP58546 118 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 EEF1A1P68104 462 aaKnown RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CDK6Q00534 326 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CBFBQ13951 182 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CYLC2Q14093 348 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CDSNQ15517 529 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 RPS26P11Q5JNZ5 115 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GCNT6Q5T4J0 391 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 C1orf185Q5T7R7 199 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 RNF220Q5VTB9 566 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 NSUN5P2Q63ZY6 315 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 XKRXQ6PP77 449 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 HMGN2P46Q86SG4 172 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 MRGPRGQ86SM5 289 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 SERPINA11Q86U17 422 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 GGNQ86UU5 652 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 PEX5LQ8IYB4 626 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 OR8J3Q8NGG0 315 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 OR5M1Q8NGP8 315 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 CNOT9Q92600 299 aaKnown RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 ADGRG7Q96K78 797 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 MRGPRX4Q96LA9 322 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 SLC39A3Q9BRY0 314 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-204ENST00000563130 AP4B1Q9Y6B7 739 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 HEATR5AQ86XA9 2040 aa5.58□□□□□ -1.52
CNOT1-204ENST00000563130 PCNX1Q96RV3 2341 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PHF3Q92576 2039 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MBD3L4A6NDZ8 208 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MBD3L3A6NE82 208 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM247A6NEH6 219 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MBD3L5A6NJ08 208 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 H0YC42 278 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 FAAHO00519 579 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ADAMDEC1O15204 470 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CLDN1O95832 211 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 GHRHP01286 108 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 COX4I1P13073 169 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 TCEA1P23193 301 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SLC6A2P23975 617 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CEACAM8P31997 349 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 TPD52P55327 224 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CLDN20P56880 219 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PCBP3P57721 371 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RAC1P63000 192 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RBBP4Q09028 425 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PMPCAQ10713 525 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 FOXF1Q12946 379 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CAPRIN1Q14444 709 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 QPRTQ15274 297 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 SF3B4Q15427 424 aaKnown RBP eCLIP5.57□□□□□ -1.522e-6■■□□□ 13.7
CNOT1-204ENST00000563130 CTU2Q2VPK5 515 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MMEL1Q495T6 779 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MRPL2Q5T653 305 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 REEP3Q6NUK4 255 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 C8orf82Q6P1X6 216 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CALHM3Q86XJ0 350 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 VRK2Q86Y07 508 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 LACC1Q8IV20 430 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 POU5F2Q8N7G0 328 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 PCYOX1LQ8NBM8 494 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 OR52P1PQ8NH57 321 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 FBXO27Q8NI29 283 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 BBS10Q8TAM1 723 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 WDR60Q8WVS4 1066 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ST8SIA1Q92185 356 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RND1Q92730 232 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RNF145Q96MT1 663 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 TUBA1CQ9BQE3 449 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 GPATCH1Q9BRR8 931 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 THUMPD3Q9BV44 507 aaKnown RBP5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CALHM2Q9HA72 323 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 RLIMQ9NVW2 624 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 ALKBH4Q9NXW9 302 aa5.57□□□□□ -1.52
CNOT1-204ENST00000563130 CLCF1Q9UBD9 225 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms