RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 FBXO27Q8NI29 283 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 TAMM41Q96BW9 452 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 ARHGDIGQ99819 225 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 PCDHAC1Q9H158 963 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 SPAG4Q9NPE6 437 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 CD300AQ9UGN4 299 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 ACAD8Q9UKU7 415 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
CDH1-204ENST00000562118 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
CDH1-204ENST00000562118 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
CDH1-204ENST00000562118 MPDZO75970 2070 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 TRGV8A0A0C4DH27 118 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 CCT8L1PA6NM43 557 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 AP3D1O14617 1153 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 TPST1O60507 370 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 SERPINB7O75635 380 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 LGI1O95970 557 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 RNF224P0DH78 156 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 IL11P20809 199 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
CDH1-204ENST00000562118 TIMP3P35625 211 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 GSK3BP49841 420 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 MAP2K6P52564 334 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 SUCLG1P53597 346 aaKnown RBP12.09□□□□□ -0.47
CDH1-204ENST00000562118 CASP6P55212 293 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 SELENBP1Q13228 472 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 ART3Q13508 389 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 NRF1Q16656 503 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 DUSP7Q16829 419 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 GLIPR1L2Q4G1C9 344 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 C6orf89Q6UWU4 347 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 PLEKHM3Q6ZWE6 761 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 ZNF550Q7Z398 422 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 GRINAQ7Z429 371 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 MICU2Q8IYU8 434 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 RPRMLQ8N4K4 120 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 OR2T12Q8NG77 320 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 OR5M9Q8NGP3 310 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 TUBA1CQ9BQE3 449 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 TTYH2Q9BSA4 534 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 C1orf21Q9H246 121 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 ALG2Q9H553 416 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
CDH1-204ENST00000562118 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 KDM4EB2RXH2 506 aaPredicted RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 FAM47E-STBD1D6RA91 191 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 M0QX08 132 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 CCL21O00585 134 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 TPST2O60704 377 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 FMO6PO60774 539 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 GLI4P10075 376 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 PRG2P13727 222 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 HSD17B1P14061 328 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 CALB2P22676 271 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 SLC1A3P43003 542 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 CPA2P48052 419 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 STARP49675 285 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 MNAT1P51948 309 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 CLDN20P56880 219 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 LIPEQ05469 1076 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 SF3B4Q15427 424 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDH1-204ENST00000562118 GUSBP1Q15486 140 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 RIPPLY2Q5TAB7 128 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 B3GNT6Q6ZMB0 384 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 ESPNLQ6ZVH7 1005 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 TRPM8Q7Z2W7 1104 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 FJX1Q86VR8 437 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 ARMC8Q8IUR7 673 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 LACC1Q8IV20 430 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 OR5M1Q8NGP8 315 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 ITLN2Q8WWU7 325 aaPredicted RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 RASSF5Q8WWW0 418 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 NSL1Q96IY1 281 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 WFDC6Q9BQY6 131 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 EXO5Q9H790 373 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 COQ10BQ9H8M1 238 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 C12orf10Q9HB07 376 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
CDH1-204ENST00000562118 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
CDH1-204ENST00000562118 ZNF208O43345 1280 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 GMFGO60234 142 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 TOXO94900 526 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 HTR2AP28223 471 aa12.07□□□□□ -0.48
CDH1-204ENST00000562118 HTR1EP28566 365 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms