RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 JAM3Q9BX67 310 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 AICDAQ9GZX7 198 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 C20orf85Q9H1P6 137 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 GAREM1Q9H706 876 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 NEUROD4Q9HD90 331 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 MLXQ9UH92 298 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 A0A0A6YYD5 115 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 MCRIP1C9JLW8 97 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 LGALS8O00214 317 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 LRRTM2O43300 516 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 GSTZ1O43708 216 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 B4GALT2O60909 372 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 SDC3O75056 442 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 AQP8O94778 261 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 TOXO94900 526 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 APOC3P02656 99 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 IFNA4P05014 189 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 S100A6P06703 90 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 SYPP08247 313 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 S100A11P31949 105 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 KCNJ5P48544 419 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 GIPRP48546 466 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 MAZP56270 477 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 TRA2BP62995 288 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 HSPB3Q12988 150 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 TNFAIP8L2Q6P589 184 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 IQCF1Q8N6M8 205 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 OR4D10Q8NGI6 311 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 OR1S1Q8NH92 325 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 NSMAFQ92636 917 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 RFKQ969G6 155 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 EXOSC8Q96B26 276 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 ABHD1Q96SE0 405 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 APOOQ9BUR5 198 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 ZCCHC4Q9H5U6 513 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 MVB12BQ9H7P6 319 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 EPHA6Q9UF33 1036 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 FBXL2Q9UKC9 423 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC6A5Q9Y345 797 aa12.96□□□□□ -0.33
RABGGTA-220ENST00000560998 LRIT2A6NDA9 550 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 HMSDA8MTL9 139 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 LRRN3E7EW58 273 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 CTDSPLO15194 276 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 RGS11O94810 467 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 SERPIND1P05546 499 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 CD53P19397 219 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 NTSR1P30989 418 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 THBS2P35442 1172 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 BCL6P41182 706 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 RAB13P51153 203 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 ADPRHP54922 357 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 KRT33BQ14525 404 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 HLXQ14774 488 aaPredicted RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 ZIC1Q15915 447 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 RPS26P11Q5JNZ5 115 aaPredicted RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 EOGTQ5NDL2 527 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 C6orf120Q7Z4R8 191 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF527Q8NB42 609 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC38A5Q8WUX1 472 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 MRPL38Q96DV4 380 aaKnown RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 LRRC46Q96FV0 321 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 GABRG3Q99928 467 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 LRRN3Q9H3W5 708 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 EVA1AQ9H8M9 152 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC6A20Q9NP91 592 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 ACSS1Q9NUB1 689 aaPredicted RBP12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 MED11Q9P086 117 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 CA5BQ9Y2D0 317 aa12.96□□□□□ -0.34
RABGGTA-220ENST00000560998 MYO10Q9HD67 2058 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 A0A0G2JN53 185 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 NAP1L6A6NFF2 107 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 CD8B2A6NJW9 211 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 C5orf58C9J3I9 102 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 PPM1DO15297 605 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 PRICKLE3O43900 615 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 GALR3O60755 368 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 SC5DO75845 299 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 RASGRP1O95267 797 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 BCHEP06276 602 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 CD8BP10966 210 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 GABRA1P14867 456 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 CELP19835 753 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms