RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ZNF786Q8N393 782 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TEX29Q8N6K0 151 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 C11orf44Q8N8P7 122 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 OR4L1Q8NH43 312 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 NANPQ8TBE9 248 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 HGDQ93099 445 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 SLC25A28Q96A46 364 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ADIPOR1Q96A54 375 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 GMPPAQ96IJ6 420 aaPredicted RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 FAR2Q96K12 515 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 BIRC8Q96P09 236 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 HIST1H2AAQ96QV6 131 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 PANX2Q96RD6 677 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 GAL3ST4Q96RP7 486 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TBL1YQ9BQ87 522 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 MAK16Q9BXY0 300 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 POTEKPQ9BYX7 375 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 HAUS4Q9H6D7 363 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ACTR8Q9H981 624 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 SAP30LQ9HAJ7 183 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 FANCFQ9NPI8 374 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 DDX56Q9NY93 547 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 MARCH4Q9P2E8 410 aaPredicted RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 COPS7AQ9UBW8 275 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ASIC3Q9UHC3 531 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ANAPC7Q9UJX3 599 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 AAR2Q9Y312 384 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 PCDHGB5Q9Y5G0 923 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 MED12LQ86YW9 2145 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 IQANK1A0A1B0GTG1 560 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SLC22A23A1A5C7 686 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CLPSL1A2RUU4 121 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 LRIT2A6NDA9 550 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SYNDIG1LA6NDD5 238 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 GOLGA6L10A6NI86 522 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 C17orf51A8MQB3 221 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 LYNX1G3V0Z9 82 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 GOLGA6L19H0YKK7 550 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CCDC188H7C350 402 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 RAB27BO00194 218 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 DHHO43323 396 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CDH16O75309 829 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CLPXO76031 633 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PROSCO94903 275 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 WDR47O94967 919 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PGM3O95394 542 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SYF2O95926 243 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 NGFP01138 241 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CATP04040 527 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 SERPINA6P08185 405 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 IGFBP1P08833 259 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 CCDC172P0C7W6 258 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 DHRS4L1P0CG22 281 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 LYNX1P0DP58 116 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZNF17P17021 662 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TCEA1P23193 301 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 RPS3P23396 243 aaKnown RBP eCLIP3.2□□□□□ -1.9
HERC1-211ENST00000560983 IL32P24001 234 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PTAFRP25105 342 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 MT3P25713 68 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PSMB4P28070 264 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 HNRNPH1P31943 449 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 GALNSP34059 522 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PCGF2P35227 344 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 AHRP35869 848 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 STT3AP46977 705 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SOX2P48431 317 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PGGT1BP53609 377 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TBPL1P62380 186 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 DYNLT1P63172 113 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 IGLV3-21P80748 117 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 HMGCS1Q01581 520 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ACVR1Q04771 509 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZP4Q12836 540 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ITGADQ13349 1161 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SNTA1Q13424 505 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SERTAD2Q14140 314 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 MORF4L2Q15014 288 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 EFTUD2Q15029 972 aaKnown RBP eCLIP3.2□□□□□ -1.91e-6■■■■□ 21.1
HERC1-211ENST00000560983 DPCR1Q3MIW9 517 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZNF628Q5EBL2 1059 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SAXO2Q658L1 398 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 C16orf87Q6PH81 154 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TFAP2EQ6VUC0 442 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 RBMS3Q6XE24 437 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 BZW1Q7L1Q6 419 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 BHLHA15Q7RTS1 189 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 NUFIP2Q7Z417 695 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 C17orf64Q86WR6 236 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 VSIG1Q86XK7 387 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PLCZ1Q86YW0 608 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 OR4N5Q8IXE1 308 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PRR22Q8IZ63 422 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZCCHC24Q8N2G6 241 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 SPATA6LQ8N4H0 392 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 FAM71DQ8N9W8 422 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 OR5M1Q8NGP8 315 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 OR51F2Q8NH61 342 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms