RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 P3H2Q8IVL5 708 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZDHHC21Q8IVQ6 265 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PEX5LQ8IYB4 626 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 HS3ST5Q8IZT8 346 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TAGAPQ8N103 731 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 CYP4Z2PQ8N1L4 340 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TMEM156Q8N614 296 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TNIP2Q8NFZ5 429 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OR5M1Q8NGP8 315 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OR52J3Q8NH60 311 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PHOSPHO1Q8TCT1 267 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 THAP4Q8WY91 577 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 LRTOMTQ8WZ04 291 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PYURFQ96I23 114 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 C7orf34Q96L11 122 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 FER1L6-AS2Q96M78 137 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 JSRP1Q96MG2 331 aaPredicted RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZNF607Q96SK3 696 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ARHGDIGQ99819 225 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DOHHQ9BU89 302 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 EFHD1Q9BUP0 239 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 CHID1Q9BWS9 393 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OSBPL11Q9BXB4 747 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DPH1Q9BZG8 443 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TBL1XR1Q9BZK7 514 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 TRIM15Q9C019 465 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AMBRA1Q9C0C7 1298 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SEMA6AQ9H2E6 1030 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MUC13Q9H3R2 512 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 METTL7AQ9H8H3 244 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 S100A14Q9HCY8 104 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 SH2D2AQ9NP31 389 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 KLHL1Q9NR64 748 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 OLAHQ9NV23 265 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 HPF1Q9NWY4 346 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ADPRHL2Q9NX46 363 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 THUMPD1Q9NXG2 353 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 STMN3Q9NZ72 180 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PRR13Q9NZ81 148 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 KLRF1Q9NZS2 232 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MED11Q9P086 117 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 FBXL2Q9UKC9 423 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 CNOT11Q9UKZ1 510 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 SAMD4AQ9UPU9 718 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 LIPT1Q9Y234 373 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 AP3M1Q9Y2T2 418 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ZNF281Q9Y2X9 895 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 YARS2Q9Y2Z4 477 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 TESMINQ9Y4I5 508 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DTNAQ9Y4J8 743 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 PCDHGB3Q9Y5G1 929 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 MAGED1Q9Y5V3 778 aaPredicted RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 PTPRQQ9UMZ3 2332 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 ITPR1Q14643 2758 aa4.75□□□□□ -1.65
SPG11-220ENST00000559933 DSPP15924 2871 aaKnown RBP4.75□□□□□ -1.65
SPG11-220ENST00000559933 USP9XQ93008 2570 aaPredicted RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 URB1O60287 2271 aaKnown RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 PCNX3Q9H6A9 2034 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 TMEM82A0PJX8 343 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 OR6C70A6NIJ9 312 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 LRRC3CA6NJW4 275 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 FAM166BA8MTA8 275 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 K7ENP7 123 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 GTPBP1O00178 669 aaKnown RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 RRP8O43159 456 aaKnown RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 HCRTR2O43614 444 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 HS6ST1O60243 411 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 GMNNO75496 209 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 SLC25A12O75746 678 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 NEURL1O76050 574 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 WISP2O76076 250 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 PDE9AO76083 593 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 STAMBPO95630 424 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 ATP6V1G2O95670 118 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 BAG2O95816 211 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 CSTAP01040 98 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 OPN1LWP04000 364 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 FABP3P05413 133 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 RFPL3SP0C7P2 107 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 UBL4AP11441 157 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 ICAM2P13598 275 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 ETS2P15036 469 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 HPGDP15428 266 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 CCNA2P20248 432 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 TBXA2RP21731 343 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 PSMA4P25789 261 aaKnown RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 SLC7A1P30825 629 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 PRKAR1BP31321 381 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 CASP3P42574 277 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 ACAA2P42765 397 aaKnown RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 MAGEA8P43361 318 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 HLCSP50747 726 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 PNLIPRP2P54317 469 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 RRADP55042 308 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 RGS8P57771 180 aaPredicted RBP4.74□□□□□ -1.65
SPG11-220ENST00000559933 SELENOWP63302 87 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 ARG2P78540 354 aa4.74□□□□□ -1.65
SPG11-220ENST00000559933 TXNL4AP83876 142 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms