RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 ZNF619Q8N2I2 560 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 ANKFN1Q8N957 763 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 DNAJA3Q96EY1 480 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 OR5B2Q96R09 309 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 ACTR6Q9GZN1 396 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 LAT2Q9GZY6 243 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 MANSC1Q9H8J5 431 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 TMBIM4Q9HC24 238 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 KLHL13Q9P2N7 655 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 BTNL2Q9UIR0 455 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 GPR45Q9Y5Y3 372 aa10.63□□□□□ -0.71
HERC1-202ENST00000558324 MPDZO75970 2070 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 AKAP6Q13023 2319 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 PRAMEF27A3QJZ7 478 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 CLDN24A6NM45 220 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 HMGN4O00479 90 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 THBDP07204 575 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 PGCP20142 388 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 PGM1P36871 562 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 ADAM8P78325 824 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 CHRNEQ04844 493 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 TSC22D1Q15714 1073 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 SLC9B1Q4ZJI4 515 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 SLC25A53Q5H9E4 307 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 BEND6Q5SZJ8 279 aaPredicted RBP10.62□□□□□ -0.71
HERC1-202ENST00000558324 TFAP2EQ6VUC0 442 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 BEND4Q6ZU67 534 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 MAVSQ7Z434 540 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 CXorf67Q86X51 503 aaPredicted RBP10.62□□□□□ -0.71
HERC1-202ENST00000558324 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 WFDC11Q8NEX6 87 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 ZNF563Q8TA94 476 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 TMEM234Q8WY98 164 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 ST8SIA1Q92185 356 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 ARL8AQ96BM9 186 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 TLCD1Q96CP7 247 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 ZG16BQ96DA0 208 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 FANCFQ9NPI8 374 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 SLC35A3Q9Y2D2 325 aa10.62□□□□□ -0.71
HERC1-202ENST00000558324 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.61□□□□□ -0.71
HERC1-202ENST00000558324 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 SMAD9O15198 467 aaKnown RBP10.61□□□□□ -0.71
HERC1-202ENST00000558324 PRKD3O94806 890 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 FESP07332 822 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 CHRM4P08173 479 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 TFPIP10646 304 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 NID1P14543 1247 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 CCNA2P20248 432 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 SYPL1Q16563 259 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 COX20Q5RI15 118 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 PLEKHM3Q6ZWE6 761 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.61□□□□□ -0.71
HERC1-202ENST00000558324 FAM71CQ8NEG0 241 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 RAB3IL1Q8TBN0 382 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 ZNF775Q96BV0 537 aaPredicted RBP10.61□□□□□ -0.71
HERC1-202ENST00000558324 OR52B2Q96RD2 323 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 CCL19Q99731 98 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 CTPS2Q9NRF8 586 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 POLE3Q9NRF9 147 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 SERINC1Q9NRX5 453 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 ACER3Q9NUN7 267 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
HERC1-202ENST00000558324 KLHL9Q9P2J3 617 aa10.61□□□□□ -0.71
HERC1-202ENST00000558324 PRRC2AP48634 2157 aaKnown RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 ETV2O00321 342 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 RFXANKO14593 260 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 AP3D1O14617 1153 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 DNAJA2O60884 412 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ADAM11O75078 769 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 SLC22A3O75751 556 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ANP32DO95626 131 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 YES1P07947 543 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 NR2F1P10589 423 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 IDO1P14902 403 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 PPP3CBP16298 524 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 IL32P24001 234 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 LOXP28300 417 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 DIO1P49895 249 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ANXA11P50995 505 aaKnown RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 SLC18A1P54219 525 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 RAC3P60763 192 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 NKX6-1P78426 367 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 KCNJ10P78508 379 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 PLAURQ03405 335 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ACKR1Q16570 336 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 PDCD4Q53EL6 469 aaKnown RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 SYT14P1Q58G82 188 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 BEX5Q5H9J7 111 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 SLC43A2Q8N370 569 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ARFGAP2Q8N6H7 521 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 OR9I1Q8NGQ6 314 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 CNOT9Q92600 299 aaKnown RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 PLPPR2Q96GM1 343 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 ZNF300Q96RE9 604 aaPredicted RBP10.6□□□□□ -0.71
HERC1-202ENST00000558324 PSD2Q9BQI7 771 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 SAP130Q9H0E3 1048 aa10.6□□□□□ -0.71
HERC1-202ENST00000558324 SLC38A1Q9H2H9 487 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms