RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 SORCS2Q96PQ0 1159 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 OR5B2Q96R09 309 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 TRMOQ9BU70 441 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 ADAM19Q9H013 955 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 PIGUQ9H490 435 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 FKRPQ9H9S5 495 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 MYOZ1Q9NP98 299 aaPredicted RBP16.08■□□□□ 0.16
ABCD4-228ENST00000557588 ASB6Q9NWX5 421 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 GIN1Q9NXP7 522 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 CCL27Q9Y4X3 112 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 ATP23Q9Y6H3 246 aa16.08■□□□□ 0.16
ABCD4-228ENST00000557588 NPIPA5A0A0B4J1W7 369 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 LOC390937A0A1W2PQ73 354 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 CCT8L1PA6NM43 557 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 NPIPA7E9PJI5 369 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 TGFAP01135 160 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 SNRPAP09012 282 aaKnown RBP16.07■□□□□ 0.16
ABCD4-228ENST00000557588 NPIPA8P0DM63 369 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 ZNF23P17027 643 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 ITGA2P17301 1181 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 ATP6V1C1P21283 382 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 DIO1P49895 249 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 QPRTQ15274 297 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 GABRA6Q16445 453 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 SWI5Q1ZZU3 235 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 OR7E24Q6IFN5 339 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 LRIG3Q6UXM1 1119 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 UBE2J2Q8N2K1 259 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 OR5W2Q8NH69 310 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 C3orf49Q96BT1 292 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 FAM120BQ96EK7 910 aaKnown RBP16.07■□□□□ 0.16
ABCD4-228ENST00000557588 FCRL1Q96LA6 429 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 CCT7Q99832 543 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 REEP4Q9H6H4 257 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 ANKZF1Q9H8Y5 726 aa16.07■□□□□ 0.16
ABCD4-228ENST00000557588 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
ABCD4-228ENST00000557588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
ABCD4-228ENST00000557588 ZNF716A6NP11 495 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 ESPNB1AK53 854 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 POC1B-GALNT4F8VUJ3 575 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 NPIPB9F8W1W9 429 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 H3BQF6 201 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 HMGN2P05204 90 aaKnown RBP16.06■□□□□ 0.16
ABCD4-228ENST00000557588 ITGA5P08648 1049 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 MST1LQ2TV78 715 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 C12orf54Q6X4T0 127 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 C17orf78Q8N4C9 275 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-228ENST00000557588 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 ARL8AQ96BM9 186 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 SOX7Q9BT81 388 aa16.06■□□□□ 0.16
ABCD4-228ENST00000557588 SIRT3Q9NTG7 399 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-228ENST00000557588 NOSIPQ9Y314 301 aaKnown RBP16.06■□□□□ 0.16
ABCD4-228ENST00000557588 HEATR1Q9H583 2144 aaKnown RBP16.06■□□□□ 0.16
ABCD4-228ENST00000557588 ATP6V1G2-DDX39BF2Z307 99 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 PDLIM1O00151 329 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 GTPBP1O00178 669 aaKnown RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 DNAJA2O60884 412 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 UBL4AP11441 157 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 ATP12AP54707 1039 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 CSNK2A1P68400 391 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 SLC25A3Q00325 362 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 CBFBQ13951 182 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 LASP1Q14847 261 aaKnown RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 TIGD2Q4W5G0 525 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 DCST2Q5T1A1 773 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 C1QTNF12Q5T7M4 302 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 CDC73Q6P1J9 531 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 TIFABQ6ZNK6 161 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 TMPPEQ6ZT21 453 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 ZNF572Q7Z3I7 529 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 TMCO5AQ8N6Q1 288 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 WDR31Q8NA23 367 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 FOXN4Q96NZ1 517 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 BPESC1Q9GZL8 116 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 QRSL1Q9H0R6 528 aaKnown RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 ZCCHC3Q9NUD5 404 aaKnown RBP16.05■□□□□ 0.16
ABCD4-228ENST00000557588 DTNAQ9Y4J8 743 aa16.05■□□□□ 0.16
ABCD4-228ENST00000557588 ZNF264O43296 627 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 EIF4E2O60573 245 aaKnown RBP16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SEC22BO75396 215 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SDC1P18827 310 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 CCR4P51679 360 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SLC16A1P53985 500 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 FOXG1P55316 489 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SNRPD2P62316 118 aaKnown RBP16.04■□□□□ 0.16
ABCD4-228ENST00000557588 MLC1Q15049 377 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SYT14P1Q58G82 188 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 MTDHQ86UE4 582 aaKnown RBP16.04■□□□□ 0.16
ABCD4-228ENST00000557588 ZNF540Q8NDQ6 660 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 RFWD2Q8NHY2 731 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 SLC25A43Q8WUT9 341 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-228ENST00000557588 ST8SIA1Q92185 356 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 FBXO17Q96EF6 278 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 CHMP6Q96FZ7 201 aa16.04■□□□□ 0.16
ABCD4-228ENST00000557588 C1QTNF6Q9BXI9 259 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms