RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 OR4D2P58180 307 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 VAMP2P63027 116 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 DYNLL1P63167 89 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 VLDLRP98155 873 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SLC25A11Q02978 314 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TLE4Q04727 773 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 MLLT11Q13015 90 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 HNRNPA0Q13151 305 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SKP2Q13309 424 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SQSTM1Q13501 440 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CDH18Q13634 790 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 C1DQ13901 141 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 RPS6KA2Q15349 733 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 RSU1Q15404 277 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SSX1Q16384 188 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 NTRK2Q16620 822 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GSG1Q2KHT4 349 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 USP39Q53GS9 565 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SLC22A10Q63ZE4 541 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CPZQ66K79 652 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TBC1D3GQ6DHY5 549 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TBC1D3CQ6IPX1 549 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 EIF5AL1Q6IS14 154 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ACSM5Q6NUN0 579 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 C1orf94Q6P1W5 598 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 IL34Q6ZMJ4 242 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ABHD13Q7L211 337 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 HIST3H2AQ7L7L0 130 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SSX6Q7RTT6 188 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CMC1Q7Z7K0 106 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GPR149Q86SP6 731 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CUZD1Q86UP6 607 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TMEM200AQ86VY9 491 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TBC1D3Q8IZP1 549 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 STK40Q8N2I9 435 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SYNPOQ8N3V7 929 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 MYCT1Q8N699 235 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ZNF248Q8NDW4 579 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TMEM185AQ8NFB2 350 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 NUDT10Q8NFP7 164 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 OR5M1Q8NGP8 315 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 OR9I1Q8NGQ6 314 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 OR10A6Q8NH74 314 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 RPLP0P6Q8NHW5 317 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TFGQ92734 400 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 HIST1H2ACQ93077 130 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ARL11Q969Q4 196 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 PPP1R14AQ96A00 147 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 HIST1H2BAQ96A08 127 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 FAM162AQ96A26 154 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TM4SF18Q96CE8 201 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 LINGO1Q96FE5 620 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 HMCESQ96FZ2 354 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CMTM7Q96FZ5 175 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SMARCD1Q96GM5 515 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CCDC74BQ96LY2 380 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 KCTD7Q96MP8 289 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ACCSQ96QU6 501 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 DDOQ99489 341 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GPR22Q99680 433 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 WRAP53Q9BUR4 548 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 MRI1Q9BV20 369 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TMEM39BQ9GZU3 492 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ABCG5Q9H222 651 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 DHX35Q9H5Z1 703 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 METTL17Q9H7H0 456 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 PTGES2Q9H7Z7 377 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SLC25A19Q9HC21 320 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GPN1Q9HCN4 374 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 IL23AQ9NPF7 189 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SLC52A3Q9NQ40 469 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ACSS1Q9NUB1 689 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 TMEM248Q9NWD8 314 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 ZIM2Q9NZV7 527 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 NCDNQ9UBB6 729 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 PLEKHB1Q9UF11 243 aaPredicted RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SUSD2Q9UGT4 822 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 IL19Q9UHD0 177 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CLEC2DQ9UHP7 191 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 UBQLN1Q9UMX0 589 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SAMD4AQ9UPU9 718 aaKnown RBP4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 MOKQ9UQ07 419 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 GSTK1Q9Y2Q3 226 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 STARD10Q9Y365 291 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 FBXO7Q9Y3I1 522 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 KCTD3Q9Y597 815 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 NUP98P52948 1817 aa4.28□□□□□ -1.72
HNRNPC-229ENST00000557157 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
HNRNPC-229ENST00000557157 CCDC187A0A096LP49 1063 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms