RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-219ENST00000556432 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 ARFGEF3Q5TH69 2177 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 SNUPNO95149 360 aaKnown RBP12.19□□□□□ -0.46
ACTN1-219ENST00000556432 IFI6P09912 130 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 GUCY2DQ02846 1103 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 SWI5Q1ZZU3 235 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 UNC50Q53HI1 259 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 ZNF678Q5SXM1 525 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 KLHL24Q6TFL4 600 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 SPATA19Q7Z5L4 167 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 GPR119Q8TDV5 335 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 HOXB13Q92826 284 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-219ENST00000556432 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 KCNS3Q9BQ31 491 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 BTBD2Q9BX70 525 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 QRSL1Q9H0R6 528 aaKnown RBP12.19□□□□□ -0.46
ACTN1-219ENST00000556432 ICAM5Q9UMF0 924 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 WBP11Q9Y2W2 641 aaKnown RBP12.19□□□□□ -0.46
ACTN1-219ENST00000556432 ACTL7BQ9Y614 415 aa12.19□□□□□ -0.46
ACTN1-219ENST00000556432 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 A0A0A6YYJ9 748 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SLCO1B7G3V0H7 640 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SULT2B1O00204 365 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
ACTN1-219ENST00000556432 CRCPO75575 148 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 H6PDO95479 791 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 HSPA4LO95757 839 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SBK3P0C264 359 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 TFPIP10646 304 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 PCMT1P22061 227 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 IL2RGP31785 369 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SERPINF1P36955 418 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 MAGEA12P43365 314 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 DIO1P49895 249 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 PKNOX1P55347 436 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-219ENST00000556432 LCP2Q13094 533 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 QPRTQ15274 297 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 GABRA6Q16445 453 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 NOXRED1Q6NXP6 359 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 CDC73Q6P1J9 531 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 CASP12Q6UXS9 341 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SEMA6DQ8NFY4 1073 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 CDS1Q92903 461 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 PPCDCQ96CD2 204 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 ZHX1-C8orf76Q96EF9 292 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 GIMAP5Q96F15 307 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 RAB17Q9H0T7 212 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SERINC1Q9NRX5 453 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 SIRT5Q9NXA8 310 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 AMDHD2Q9Y303 409 aa12.18□□□□□ -0.46
ACTN1-219ENST00000556432 AKAP10O43572 662 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 CYP7B1O75881 506 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SLU7O95391 586 aaKnown RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 ERCC1P07992 297 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 ITGA5P08648 1049 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 EFNA1P20827 205 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SERPINB9P50453 376 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 C2orf54Q08AI8 447 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SCGB2A2Q13296 93 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 CBFBQ13951 182 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 CCNIQ14094 377 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 TIGD2Q4W5G0 525 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 ABLIM2Q6H8Q1 611 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SHQ1Q6PI26 577 aaKnown RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 WDR31Q8NA23 367 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 OR52E4Q8NGH9 312 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 OR5W2Q8NH69 310 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 FAM76AQ8TAV0 307 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 ZNF418Q8TF45 676 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-219ENST00000556432 HPS1Q92902 700 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 DNAJA3Q96EY1 480 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 RAB1BQ9H0U4 201 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 MALT1Q9UDY8 824 aa12.17□□□□□ -0.46
ACTN1-219ENST00000556432 IGKV3D-15A0A087WSY6 115 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 TRIM49D1C9J1S8 452 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 GPR171O14626 319 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 STAMBPO95630 424 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 WNT11O96014 354 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 UBL4AP11441 157 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 DAOP14920 347 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-219ENST00000556432 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 TGFBR3Q03167 851 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 LGALS3BPQ08380 585 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 MERTKQ12866 999 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 LASP1Q14847 261 aaKnown RBP12.16□□□□□ -0.46
ACTN1-219ENST00000556432 PDLIM3Q53GG5 364 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms