RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 Q6ZT83 130 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 CROCCP2Q86T23 111 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 CLECL1Q8IZS7 167 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF614Q8N883 585 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 S100PBPQ96BU1 408 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 NEURL3Q96EH8 262 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 PKNOX2Q96KN3 472 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 SORT1Q99523 831 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 DPY30Q9C005 99 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 C12orf49Q9H741 205 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 EXOSC3Q9NQT5 275 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 SERINC1Q9NRX5 453 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 KCNE5Q9UJ90 142 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ING1Q9UK53 422 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 NAV3Q8IVL0 2385 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 DNPH1O43598 174 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 CSTAP01040 98 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 ENPP1P22413 925 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 IL32P24001 234 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 PGM1P36871 562 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 APOBEC1P41238 236 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 OR3A2P47893 321 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 SLC1A6P48664 564 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 PTH2RP49190 550 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 CASP8Q14790 479 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 PDK3Q15120 406 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 GPR68Q15743 365 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 NDUFAF6Q330K2 333 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 TIGD2Q4W5G0 525 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 C16orf62Q7Z3J2 963 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 OR4A15Q8NGL6 344 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 PMM1Q92871 262 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 Q96MF0 132 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 THUMPD3Q9BV44 507 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 C20orf27Q9GZN8 174 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 MEAF6Q9HAF1 191 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 ACER3Q9NUN7 267 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 WDR45Q9Y484 360 aa11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-221ENST00000555883 IGKV3D-15A0A087WSY6 115 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CENPVL1A0A0U1RR11 272 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 ZNF814B7Z6K7 855 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 E9PBE3 544 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 SMAD9O15198 467 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 H6PDO95479 791 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 LBPP18428 481 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CLK1P49759 484 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 KHKP50053 298 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CCR4P51679 360 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 SESN3P58005 492 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 PHC1P78364 1004 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 RASGEF1BQ0VAM2 473 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 ETFDHQ16134 617 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 SYT14P1Q58G82 188 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 NCMAPQ5T1S8 102 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 ABLIM2Q6H8Q1 611 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 TYW3Q6IPR3 259 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 TMPPEQ6ZT21 453 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 P2RY8Q86VZ1 359 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CMIPQ8IY22 773 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 PERPQ96FX8 193 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CCDC115Q96NT0 180 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 OR5B2Q96R09 309 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 SMR3AQ99954 134 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 CCDC106Q9BWC9 280 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 RAB21Q9UL25 225 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 RNF115Q9Y4L5 304 aa11.27□□□□□ -0.61
HNRNPC-221ENST00000555883 A0A1W2PNR3 127 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 WDR91A4D1P6 747 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 H7C1Q1 480 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 OVOL3O00110 214 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 ADAP00813 363 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 UBTFL6P0CB48 400 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 COX5AP20674 150 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 MAGEA8P43361 318 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 DIO1P49895 249 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 ANXA11P50995 505 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 MAP2K6P52564 334 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 FUT5Q11128 374 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 STX3Q13277 289 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 TAB1Q15750 504 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 MAPK14Q16539 360 aa11.26□□□□□ -0.61
HNRNPC-221ENST00000555883 SPANXN4Q5MJ08 99 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms