RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SLC38A6Q8IZM9 456 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 KIR3DL3Q8N743 410 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR5L2Q8NGL0 311 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 EMG1Q92979 244 aaKnown RBP3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 MCHR1Q99705 422 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 EDEM2Q9BV94 578 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 Q9H3A6 140 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 SMYD3Q9H7B4 428 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 GORASP2Q9H8Y8 452 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZNF702PQ9H963 129 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 NUDT15Q9NV35 164 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 EXTL2Q9UBQ6 330 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 CLEC4EQ9ULY5 219 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 MOKQ9UQ07 419 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 SCML2Q9UQR0 700 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 PLLPQ9Y342 182 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLCO1B1Q9Y6L6 691 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 PBRM1Q86U86 1689 aa3.99□□□□□ -1.77
CKS1BP1-201ENST00000555221 PLB1Q6P1J6 1458 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 PTCH1Q13635 1447 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 KLF18A0A0U1RQI7 1052 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 E7ESA3 106 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 SULT2B1O00204 365 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 TNFSF11O14788 317 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 ARPC3O15145 178 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 TAPBPO15533 448 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 LYPLA1O75608 230 aaPredicted RBP3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 SCGNO76038 276 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 ZNF44P15621 663 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 BCL2L1Q07817 233 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 LRRC36Q1X8D7 754 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 CASC1Q6TDU7 716 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 CXCL17Q6UXB2 119 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 FAM43BQ6ZT52 329 aaPredicted RBP3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 CCDC80Q76M96 950 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 CLEC4FQ8N1N0 589 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR4D5Q8NGN0 318 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 TCTEX1D2Q8WW35 142 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 MRPS31Q92665 395 aaKnown RBP3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 HAVCR1Q96D42 359 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC25A38Q96DW6 304 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 FAM122AQ96E09 287 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 PELI1Q96FA3 418 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 MS4A14Q96JA4 679 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 TGM7Q96PF1 710 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC35A5Q9BS91 424 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 GLIPR2Q9H4G4 154 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 FANCFQ9NPI8 374 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 SLC17A5Q9NRA2 495 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 UFSP2Q9NUQ7 469 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 ANGPTL2Q9UKU9 493 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 TP53TG3Q9ULZ0 132 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 UGGT2Q9NYU1 1516 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 KDRP35968 1356 aa3.98□□□□□ -1.77
CKS1BP1-201ENST00000555221 IQGAP2Q13576 1575 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CEP170Q5SW79 1584 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 IGHV7-81A0A0B4J1V7 117 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CLRN2A0PK11 232 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 RS1O15537 224 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 HCN1O60741 890 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 ECI2O75521 394 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 LALBAP00709 142 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 IGKV3-15P01624 115 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 P0C879 139 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 HSMCR30P0CW71 290 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 PNMTP11086 282 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 RNH1P13489 461 aaKnown RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 LAP3P28838 519 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 NTSP30990 170 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 P2RY1P47900 373 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 TDO2P48775 406 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 HNRNPA3P51991 378 aaKnown RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 PLK1P53350 603 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 MAP2K1Q02750 393 aaPredicted RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CUL1Q13616 776 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 AANATQ16613 207 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CFAP221Q4G0U5 840 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 BEND3Q5T5X7 828 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 TRPM8Q7Z2W7 1104 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 C17orf82Q86X59 251 aaPredicted RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CCDC50Q8IVM0 306 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 SKA3Q8IX90 412 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 UBQLNLQ8IYU4 475 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 FAM133AQ8N9E0 248 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 BADQ92934 168 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 NOL4LQ96MY1 436 aaPredicted RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 NIPSNAP3BQ9BS92 247 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 RHBGQ9H310 441 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 ISG20L2Q9H9L3 353 aaKnown RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 APMAPQ9HDC9 416 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 SMPD3Q9NY59 655 aaPredicted RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 B3GNT2Q9NY97 397 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 WARS2Q9UGM6 360 aaKnown RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CA5BQ9Y2D0 317 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 AK6Q9Y3D8 172 aaKnown RBP3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CHD1O14646 1710 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 UHRF1BP1LA0JNW5 1464 aa3.97□□□□□ -1.77
CKS1BP1-201ENST00000555221 CFAP65Q6ZU64 1925 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms