RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 RNF220Q5VTB9 566 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 NANOGP8Q6NSW7 305 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF836Q6ZNA1 936 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ESPNLQ6ZVH7 1005 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 CHMP1BQ7LBR1 199 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 PIGWQ7Z7B1 504 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 PTOV1Q86YD1 416 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 GRAMD2AQ8IUY3 354 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 NFKBIDQ8NI38 313 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 RP9Q8TA86 221 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 BBS10Q8TAM1 723 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 TMEM234Q8WY98 164 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 FIG4Q92562 907 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 LRRC58Q96CX6 371 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 TMEM185BQ9H7F4 350 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 NANOGQ9H9S0 305 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 CHST11Q9NPF2 352 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 KCNJ16Q9NPI9 418 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF443Q9Y2A4 671 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF175Q9Y473 711 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 ITPR2Q14571 2701 aa11.61□□□□□ -0.55
MTHFD1-208ENST00000554739 PCNX3Q9H6A9 2034 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 NKX2-6A6NCS4 301 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SLC22A20A6NK97 555 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 MRASO14807 208 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 PABPC4LP0CB38 370 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 ME2P23368 584 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SLC6A2P23975 617 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 CTSSP25774 331 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SHC1P29353 583 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 GZMMP51124 257 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 TFF3Q07654 80 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 MERTKQ12866 999 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 FOXF2Q12947 444 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SCARB2Q14108 478 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 REP15Q6BDI9 236 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 TREML1Q86YW5 311 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 OR10D3Q8NH80 312 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 FNDC9Q8TBE3 224 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 KLHL15Q96M94 604 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SLC39A3Q9BRY0 314 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 SPATA9Q9BWV2 254 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 PINK1Q9BXM7 581 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 NSRP1Q9H0G5 558 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 MYLK2Q9H1R3 596 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 PRDM4Q9UKN5 801 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 NOTCH2Q04721 2471 aa11.6□□□□□ -0.55
MTHFD1-208ENST00000554739 TACC2O95359 2948 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 MAST4O15021 2626 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 FAM90A27PA6NNH2 459 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 FAAHO00519 579 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 DVL2O14641 736 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 TNFSF11O14788 317 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 CXCL13O43927 109 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 IL18BPO95998 194 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 GKN3PP0CG01 181 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 TMIGD3P0DMS9 266 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 COX4I1P13073 169 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 PRG2P13727 222 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 BMP5P22003 454 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 SLC1A3P43003 542 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 AGFG1P52594 562 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 CARD18P57730 90 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 RBBP4Q09028 425 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 EPS8Q12929 822 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 PON3Q15166 354 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 SGCBQ16585 318 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 CYP51A1Q16850 503 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 SLC25A35Q3KQZ1 300 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 TMEM176BQ3YBM2 270 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 RABL3Q5HYI8 236 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 HBMQ6B0K9 141 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 OR2A2Q6IF42 318 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 GRINAQ7Z429 371 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 SERPINA11Q86U17 422 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 ADGRG3Q86Y34 549 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 ZZZ3Q8IYH5 903 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 ZNF440Q8IYI8 595 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 POU5F2Q8N7G0 328 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 PCYOX1LQ8NBM8 494 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 ACBD4Q8NC06 268 aa11.59□□□□□ -0.55
MTHFD1-208ENST00000554739 C11orf65Q8NCR3 313 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms