RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NCF1CA8MVU1 366 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 AIPO00170 330 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 IL33O95760 270 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MT-ND1P03886 318 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HEXAP06865 529 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 YES1P07947 543 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ALPPL2P10696 532 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CPMP14384 443 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PAX1P15863 534 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ELK1P19419 428 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MPGP29372 298 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CRATP43155 626 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PDX1P52945 283 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MAPK12P53778 367 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ADPRHP54922 357 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PSMD4P55036 377 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CDH12P55289 794 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ACTA2P62736 377 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 RPS21P63220 83 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ACTG2P63267 376 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ITGADQ13349 1161 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HTR4Q13639 388 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GPR176Q14439 515 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 NKPD1Q17RQ9 610 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TRIM16LQ309B1 348 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 HABP4Q5JVS0 413 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 EEF1A1P5Q5VTE0 462 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 FAM46CQ5VWP2 391 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 GLDNQ6ZMI3 551 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF517Q6ZMY9 492 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF627Q7L945 461 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 TAS2R42Q7RTR8 314 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CADM2Q8N3J6 435 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MS4A15Q8N5U1 240 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CDRT4Q8N9R6 151 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF740Q8NDX6 193 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OR8K3Q8NH51 312 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 OR52P1PQ8NH57 321 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 C15orf40Q8WUR7 153 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 UFD1Q92890 307 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 SCAMP4Q969E2 229 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF524Q96C55 264 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ZC3H10Q96K80 434 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 BMFQ96LC9 184 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ING2Q9H160 280 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CCDC86Q9H6F5 360 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 LIN7BQ9HAP6 207 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MBNL1Q9NR56 388 aaKnown RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 CPNE7Q9UBL6 633 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 LHX6Q9UPM6 363 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 PRG3Q9Y2Y8 225 aaPredicted RBP3.16□□□□□ -1.9
SEC23A-207ENST00000554615 MAP4K5Q9Y4K4 846 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 ALG5Q9Y673 324 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 KCNMB2Q9Y691 235 aa3.16□□□□□ -1.9
SEC23A-207ENST00000554615 UNC119BA6NIH7 251 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SLC22A31A6NKX4 558 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 GABARAPH6UMI1 98 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 TOX3O15405 576 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 TBX1O43435 398 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 LANCL1O43813 399 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 FADS1O60427 444 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 NOL3O60936 208 aaKnown RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 PIAS2O75928 621 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF432O94892 652 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 HLA-DPB1P04440 258 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 EIF4EP06730 217 aaKnown RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 KLK1P06870 262 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 IGFBP1P08833 259 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 GIPP09681 153 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 CT45A8P0DMV1 189 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 CT45A9P0DMV2 189 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 RRASP10301 218 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 FOLR2P14207 255 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 HPGDP15428 266 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SDC2P34741 201 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 PREPP48147 710 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 LSSP48449 732 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SUMO3P55854 103 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 RPS7P62081 194 aaKnown RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SCN1BQ07699 218 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 ADAM15Q13444 863 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 PMS2P11Q13670 270 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 ARHGEF7Q14155 803 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 UBXN2BQ14CS0 331 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 MICBQ29980 383 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SOWAHCQ53LP3 525 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 CT45A2Q5DJT8 189 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 RPS26P11Q5JNZ5 115 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 OTUD3Q5T2D3 398 aaPredicted RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 ANKRD54Q6NXT1 300 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 DEGS2Q6QHC5 323 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 PAQR6Q6TCH4 344 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 TEX261Q6UWH6 196 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 PTCHD4Q6ZW05 846 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 TRMT11Q7Z4G4 463 aaKnown RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 ASCC1Q8N9N2 400 aaKnown RBP3.15□□□□□ -1.9
SEC23A-207ENST00000554615 SLC37A3Q8NCC5 494 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 CCDC54Q8NEL0 328 aa3.15□□□□□ -1.9
SEC23A-207ENST00000554615 OR52E1Q8NGJ3 308 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms