RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 LACC1Q8IV20 430 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 TNIP2Q8NFZ5 429 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF563Q8TA94 476 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ST8SIA1Q92185 356 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ZNF845Q96IR2 970 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-226ENST00000553011 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 CALHM2Q9HA72 323 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 CACYBPQ9HB71 228 aaKnown RBP12.71□□□□□ -0.37
PTCH1-226ENST00000553011 ACER3Q9NUN7 267 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 CLCF1Q9UBD9 225 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 Q9UFV3 132 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 IFT52Q9Y366 437 aa12.71□□□□□ -0.37
PTCH1-226ENST00000553011 A0A0J9YW62 118 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CD8B2A6NJW9 211 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 EIF1AYO14602 144 aaKnown RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 FRS3O43559 492 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 TPST1O60507 370 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 GCM2O75603 506 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 PRG2P13727 222 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 ELK4P28324 431 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 PCGF2P35227 344 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 SFTPDP35247 375 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 SLC6A8P48029 635 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CPA2P48052 419 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 IDH2P48735 452 aaKnown RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 NUDT2P50583 147 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 MERTKQ12866 999 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 EPS8Q12929 822 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CTU2Q2VPK5 515 aaKnown RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 PLEKHM3Q6ZWE6 761 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 COMTD1Q86VU5 262 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CALHM3Q86XJ0 350 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 GRAMD2AQ8IUY3 354 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 NAXEQ8NCW5 288 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 TMEM234Q8WY98 164 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 ADGRG7Q96K78 797 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 ZNF583Q96ND8 569 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 GPATCH1Q9BRR8 931 aaKnown RBP12.7□□□□□ -0.38
PTCH1-226ENST00000553011 PINK1Q9BXM7 581 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 EFCAB1Q9HAE3 211 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 COQ3Q9NZJ6 369 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 FREM1Q5H8C1 2179 aa12.7□□□□□ -0.38
PTCH1-226ENST00000553011 CFAP73A6NFT4 308 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 CCT8L1PA6NM43 557 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 TNFSF11O14788 317 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 DCTN3O75935 186 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 TGM6O95932 706 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 OPN1SWP03999 348 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 GP1BBP13224 206 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 AGAP20933 346 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ME2P23368 584 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 PRDX6P30041 224 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 PRKAR1BP31321 381 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 CEACAM8P31997 349 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 EIF1AXP47813 144 aaKnown RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 DLX5P56178 289 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 EEFSECP57772 596 aaKnown RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 HOXC5Q00444 222 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 DMTNQ08495 405 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 SELENBP1Q13228 472 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 VMACQ2NL98 169 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 TMEM176BQ3YBM2 270 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 GKAP1Q5VSY0 366 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 DHRS4L2Q6PKH6 230 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 LIX1LQ8IVB5 337 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ANKS4BQ8N8V4 417 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ASB5Q8WWX0 329 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 FIG4Q92562 907 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 KLHL15Q96M94 604 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ZNF607Q96SK3 696 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 CTPS2Q9NRF8 586 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 ARL8BQ9NVJ2 186 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 CMTM6Q9NX76 183 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 GMPR2Q9P2T1 348 aaKnown RBP12.69□□□□□ -0.38
PTCH1-226ENST00000553011 STOML1Q9UBI4 398 aa12.69□□□□□ -0.38
PTCH1-226ENST00000553011 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
PTCH1-226ENST00000553011 M0QX08 132 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms