RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 WDR55Q9H6Y2 383 aaPredicted RBP10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 NOL11Q9H8H0 719 aaKnown RBP10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 AHSPQ9NZD4 102 aa10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 KLHL13Q9P2N7 655 aa10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 TRAF6Q9Y4K3 522 aa10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 PTGDR2Q9Y5Y4 395 aa10.02□□□□□ -0.81
SUPT16H-202ENST00000552829 A0A087WZY1 265 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 E9PBE3 544 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 SDHDO14521 159 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 OR7A17O14581 309 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TNFSF11O14788 317 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 SMAD9O15198 467 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 HDAC3O15379 428 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 OPN1LWP04000 364 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 PABPC4LP0CB38 370 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF23P17027 643 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 EPHA3P29320 983 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 PDLIM4P50479 330 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 CCNG1P51959 295 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 BTKQ06187 659 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 C17orf67Q0P5P2 114 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 RNPS1Q15287 305 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF239Q16600 458 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 CYP27C1Q4G0S4 372 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TCHHL1Q5QJ38 904 aaPredicted RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TMEM201Q5SNT2 666 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 HBMQ6B0K9 141 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF544Q6NX49 715 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 EPGNQ6UW88 154 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 Q6ZT83 130 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 COMMD6Q7Z4G1 85 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 MTDHQ86UE4 582 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 P2RY8Q86VZ1 359 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TWIST2Q8WVJ9 160 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 OR52B2Q96RD2 323 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 SIKE1Q9BRV8 207 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 BHLHE41Q9C0J9 482 aaPredicted RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 TNPO3Q9Y5L0 923 aaKnown RBP10.01□□□□□ -0.81
SUPT16H-202ENST00000552829 ANKRD65E5RJM6 399 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 PIP5K1BO14986 540 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 LYZL6O75951 148 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 SNUPNO95149 360 aaKnown RBP10□□□□□ -0.81
SUPT16H-202ENST00000552829 IL33O95760 270 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 COX5AP20674 150 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 PTAFRP25105 342 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 SHC1P29353 583 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 HMOX2P30519 316 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 OR3A2P47893 321 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 HTR6P50406 440 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 MANFP55145 182 aaKnown RBP10□□□□□ -0.81
SUPT16H-202ENST00000552829 CARD18P57730 90 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 PRR5P85299 388 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 SPOCK1Q08629 439 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 CSTF3Q12996 717 aaKnown RBP10□□□□□ -0.81
SUPT16H-202ENST00000552829 TRAF3Q13114 568 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 CPTPQ5TA50 214 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 KANK2Q63ZY3 851 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 FRG2Q64ET8 278 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 LETMD1Q6P1Q0 360 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 DEF8Q6ZN54 512 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 DDIASQ8IXT1 998 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 FITM2Q8N6M3 262 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 CDYL2Q8N8U2 506 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 OR7G2Q8NG99 324 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 OR4F6Q8NGB9 312 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 POC1BQ8TC44 478 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 MUCL1Q96DR8 90 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 FOXN4Q96NZ1 517 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 FRG2BQ96QU4 278 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF382Q96SR6 550 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 PIMREGQ9BSJ6 248 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 NMUR2Q9GZQ4 415 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 IPPKQ9H8X2 491 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 ARMCX1Q9P291 453 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 GIMAP2Q9UG22 337 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF225Q9UK10 706 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 ING1Q9UK53 422 aaPredicted RBP10□□□□□ -0.81
SUPT16H-202ENST00000552829 VDAC3Q9Y277 283 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 OR10H1Q9Y4A9 318 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 ZNF780BQ9Y6R6 833 aa10□□□□□ -0.81
SUPT16H-202ENST00000552829 FAM157AC9JC47 383 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 CLDN9O95484 217 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 ANGPTL1O95841 491 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 YES1P07947 543 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 EDNRAP25101 427 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 CD40P25942 277 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 FABP6P51161 128 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 PKNOX1P55347 436 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 NAA20P61599 178 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 TRA2BP62995 288 aaKnown RBP9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 DEFA6Q01524 100 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 ZSWIM7Q19AV6 140 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 PLPPR5Q32ZL2 321 aa9.99□□□□□ -0.81
SUPT16H-202ENST00000552829 LSM12Q3MHD2 195 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms