RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 UBL4AP11441 157 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 BMP7P18075 431 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 HTR1FP30939 366 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CD79BP40259 229 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 WNT4P56705 351 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CRYZQ08257 329 aaKnown RBP10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SKP2Q13309 424 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TIMM50Q3ZCQ8 353 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 NIPAL3Q6P499 406 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SMARCD3Q6STE5 483 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 APOOLQ6UXV4 268 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 LAPTM4BQ86VI4 370 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CROCCP3Q8IVE0 287 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CPOQ8IVL8 374 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 GID4Q8IVV7 300 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SLITRK4Q8IW52 837 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 PRR22Q8IZ63 422 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 MFSD4AQ8N468 514 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 EID2Q8N6I1 236 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF441Q8N8Z8 693 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF485Q8NCK3 441 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 OR4F15Q8NGB8 312 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 OR4D9Q8NGE8 314 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 EDAQ92838 391 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 RFKQ969G6 155 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 GAL3ST4Q96RP7 486 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF649Q9BS31 505 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TGIF2Q9GZN2 237 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 MED20Q9H944 212 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 MCCC2Q9HCC0 563 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 EXOSC3Q9NQT5 275 aaKnown RBP10.56□□□□□ -0.72
RAB5C-208ENST00000551338 FBXO8Q9NRD0 319 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 UBQLN4Q9NRR5 601 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CCDC59Q9P031 241 aaKnown RBP10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SEC14L4Q9UDX3 406 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 IGKV1D-42A0A075B6H8 117 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SYNDIG1LA6NDD5 238 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 CCDC182A6NF36 153 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 FAM183AA6NL82 134 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 PATE3B3GLJ2 98 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 CLDN25C9JDP6 229 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 GNB5O14775 395 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ICOSLGO75144 302 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 BMP4P12644 408 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 MYL12AP19105 171 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 LCN1P31025 176 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SLC6A6P31641 620 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SLC1A3P43003 542 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 FOXL2P58012 376 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 RPS3AP61247 264 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 DCAF7P61962 342 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 TUBA1BP68363 451 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 FOXK2Q01167 660 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 C1DQ13901 141 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF846Q147U1 533 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 NSDHLQ15738 373 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 OR2G6Q5TZ20 316 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 PLBD1Q6P4A8 553 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 TUBA1AQ71U36 451 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 PHC2Q8IXK0 858 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SLC43A2Q8N370 569 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 AMER2Q8N7J2 671 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF527Q8NB42 609 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SLC38A9Q8NBW4 561 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 OR51A7Q8NH64 312 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 STT3BQ8TCJ2 826 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 PHOSPHO1Q8TCT1 267 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 DNAJA4Q8WW22 397 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 TM9SF4Q92544 642 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 DAZLQ92904 295 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 NAT6Q93015 286 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 KISS1RQ969F8 398 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 TRMT61AQ96FX7 289 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ZC3H10Q96K80 434 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 OR6C1Q96RD1 312 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 TNFRSF13CQ96RJ3 184 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 CCNL2Q96S94 520 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 KLHDC3Q9BQ90 382 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 IFT27Q9BW83 186 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 JAM3Q9BX67 310 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 HCAR1Q9BXC0 346 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 WWTR1Q9GZV5 400 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
RAB5C-208ENST00000551338 SYNDIG1Q9H7V2 258 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 PALMDQ9NP74 551 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ISYNA1Q9NPH2 558 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 CMC2Q9NRP2 79 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 NDUFB11Q9NX14 153 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 MKL2Q9ULH7 1088 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 BAIAP2Q9UQB8 552 aa10.55□□□□□ -0.72
RAB5C-208ENST00000551338 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 CDC14CA4D256 554 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 FAM86C2PA6NEL3 165 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 OR6C76A6NM76 312 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms