RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 ECSITQ9BQ95 431 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 MYLK2Q9H1R3 596 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 EXOSC3Q9NQT5 275 aaKnown RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 ARL2BPQ9Y2Y0 163 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 A0A0J9YW62 118 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 CDHR4A6H8M9 788 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 NKX2-6A6NCS4 301 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 SLC22A20A6NK97 555 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 HSPB2A8KAH6 182 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 FRS3O43559 492 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 CXCL13O43927 109 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 DNAJA2O60884 412 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 NTN1O95631 604 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 TGM6O95932 706 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 NPPAP01160 153 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 THBS1P07996 1170 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 FREM3P0C091 2139 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 PABPC4LP0CB38 370 aaKnown RBP12.36□□□□□ -0.43
TROAP-213ENST00000550709 PRG2P13727 222 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ETS2P15036 469 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 CCNA2P20248 432 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ADH6P28332 368 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 GRNP28799 593 aaKnown RBP12.36□□□□□ -0.43
TROAP-213ENST00000550709 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
TROAP-213ENST00000550709 HOXC5Q00444 222 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 EPS8Q12929 822 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ART3Q13508 389 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 PON3Q15166 354 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 HSPB2Q16082 182 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 PLEKHM3Q6ZWE6 761 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 LIX1LQ8IVB5 337 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ZZZ3Q8IYH5 903 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 OR8J3Q8NGG0 315 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 OR10D3Q8NH80 312 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 OR2V1Q8NHB1 315 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 LILRB4Q8NHJ6 448 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 FNDC9Q8TBE3 224 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 TMEM234Q8WY98 164 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ST8SIA1Q92185 356 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 WNT2BQ93097 391 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 INTS12Q96CB8 462 aaKnown RBP12.36□□□□□ -0.43
TROAP-213ENST00000550709 ZNF607Q96SK3 696 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 SPATA9Q9BWV2 254 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 ACER3Q9NUN7 267 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
TROAP-213ENST00000550709 PTPN13Q12923 2485 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 CCT8L1PA6NM43 557 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 TPST1O60507 370 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 UQCRBP14927 111 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 BMP5P22003 454 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 ELK4P28324 431 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 SLC7A1P30825 629 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CEACAM8P31997 349 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 TIMP3P35625 211 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CARD18P57730 90 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 RBBP4Q09028 425 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 FOXF2Q12947 444 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CTU2Q2VPK5 515 aaKnown RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 RNF220Q5VTB9 566 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 HBMQ6B0K9 141 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 NET1Q7Z628 596 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 SERPINA11Q86U17 422 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 ARMC8Q8IUR7 673 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 ZNF440Q8IYI8 595 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 SMYD1Q8NB12 490 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
TROAP-213ENST00000550709 OSTF1Q92882 214 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CMTM5Q96DZ9 223 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 KLHL15Q96M94 604 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 TM9SF2Q99805 663 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 SPATA5L1Q9BVQ7 753 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 PRRG4Q9BZD6 226 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 KCNJ16Q9NPI9 418 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 SERINC1Q9NRX5 453 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 ADAM21Q9UKJ8 722 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 USP22Q9UPT9 525 aa12.35□□□□□ -0.43
TROAP-213ENST00000550709 A0A1W2PNR3 127 aa12.34□□□□□ -0.43
TROAP-213ENST00000550709 GJE1A6NN92 205 aa12.34□□□□□ -0.43
TROAP-213ENST00000550709 ETV2O00321 342 aaPredicted RBP12.34□□□□□ -0.43
TROAP-213ENST00000550709 ADAMDEC1O15204 470 aa12.34□□□□□ -0.43
TROAP-213ENST00000550709 SERPINB7O75635 380 aa12.34□□□□□ -0.43
TROAP-213ENST00000550709 SYNGR4O95473 234 aa12.34□□□□□ -0.43
TROAP-213ENST00000550709 OPN1SWP03999 348 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms