RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	DBI	P07108	87 aa	Known RBP	13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	NCF2	P19878	526 aa	Predicted RBP	13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	SFTPD	P35247	375 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	PCYT1A	P49585	367 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	CARD18	P57730	90 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	KRTAP10-9	P60411	292 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	SORD	Q00796	357 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	TLE4	Q04727	773 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	FADD	Q13158	208 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	SELENBP1	Q13228	472 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	PDSS1	Q5T2R2	415 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	VWA1	Q6PCB0	445 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	BTLA	Q7Z6A9	289 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	TMEM234	Q8WY98	164 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	LURAP1	Q96LR2	239 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	RAD21L1	Q9H4I0	556 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	CCDC134	Q9H6E4	229 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	A4GALT	Q9NPC4	353 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	MED4	Q9NPJ6	270 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	DNAJB12	Q9NXW2	375 aa	Known RBP	13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	CALML5	Q9NZT1	146 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	MCTS1	Q9ULC4	181 aa	Known RBP	13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	TRIM33	Q9UPN9	1127 aa		13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552	ANKRD17	O75179	2603 aa	Known RBP	13.84	□□□□□ -0.19
ECHDC2-223	ENST00000542552		A0A0G2JND7	137 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552		A0A0G2JPF8	293 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HNRNPCL2	B2RXH8	293 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HNRNPCL3	B7ZW38	293 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HNRNPCL1	O60812	293 aa	Known RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SS18L1	O75177	396 aa	Predicted RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	NUDT7	P0C024	238 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HNRNPCL4	P0DMR1	293 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CD8B	P10966	210 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	KIR2DL3	P43628	341 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CRISP3	P54108	245 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SNTB1	Q13884	538 aa	Known RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PRAMEF8	Q5VWM4	474 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PRAMEF7	Q5VXH5	474 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	DLEU7	Q6UYE1	221 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PLEKHM3	Q6ZWE6	761 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FAM214B	Q7L5A3	538 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	LUZP2	Q86TE4	346 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	KIF18B	Q86Y91	864 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CNEP1R1	Q8N9A8	125 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	WDR60	Q8WVS4	1066 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMEM19	Q96HH6	336 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF559	Q9BR84	538 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CCDC106	Q9BWC9	280 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RBM24	Q9BX46	236 aa	Known RBP	13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	COQ10B	Q9H8M1	238 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	BCL2L10	Q9HD36	194 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GALNT8	Q9NY28	637 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CRIM1	Q9NZV1	1036 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	VAPA	Q9P0L0	249 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MPDZ	O75970	2070 aa		13.83	□□□□□ -0.2
ECHDC2-223	ENST00000542552	UQCRHL	A0A096LP55	91 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FAM221A	A4D161	298 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CDHR4	A6H8M9	788 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FAAH	O00519	579 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ATP8B1	O43520	1251 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SYNGR4	O95473	234 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	BCHE	P06276	602 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	IL7R	P16871	459 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PPIB	P23284	216 aa	Known RBP	13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	APOBEC1	P41238	236 aa	Known RBP	13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MERTK	Q12866	999 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MYBPH	Q13203	477 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GNA13	Q14344	377 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF239	Q16600	458 aa	Known RBP	13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HSP90B2P	Q58FF3	399 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MRPL2	Q5T653	305 aa	Known RBP	13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CGB2	Q6NT52	195 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	C3orf33	Q6P1S2	294 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PEX5L	Q8IYB4	626 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	C10orf111	Q8N326	155 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	DPP10	Q8N608	796 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RNF128	Q8TEB7	428 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FAM222B	Q8WU58	562 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TSPEAR	Q8WU66	669 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CPNE4	Q96A23	557 aa	Predicted RBP	13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMEM120A	Q9BXJ8	343 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SRXN1	Q9BYN0	137 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PRRG4	Q9BZD6	226 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	IKZF5	Q9H5V7	419 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TIGAR	Q9NQ88	270 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GLRX2	Q9NS18	164 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FGFR1OP2	Q9NVK5	253 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PRDM4	Q9UKN5	801 aa		13.82	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SPG11	Q96JI7	2443 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	AP3D1	O14617	1153 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	THBS1	P07996	1170 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GPX2	P18283	190 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RYK	P34925	604 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RAC3	P60763	192 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SIRPA	P78324	504 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GUCY1A3	Q02108	690 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RNF220	Q5VTB9	566 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms