RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 IL18BPO95998 194 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 CGAP01215 116 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 DBIP07108 87 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 HNRNPCL4P0DMR1 293 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 PRG2P13727 222 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 IL7RP16871 459 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 IDH2P48735 452 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 ANXA11P50995 505 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 GZMMP51124 257 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 CARD18P57730 90 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 EEFSECP57772 596 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 MTPNP58546 118 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 HPCAP84074 193 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 GUSBP1Q15486 140 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 SGCBQ16585 318 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 SLC25A35Q3KQZ1 300 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 HBMQ6B0K9 141 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 VWA1Q6PCB0 445 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 MEX3BQ6ZN04 569 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 PLEKHM3Q6ZWE6 761 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 BTLAQ7Z6A9 289 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 ADGRG3Q86Y34 549 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 PTOV1Q86YD1 416 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 GRAMD2AQ8IUY3 354 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 MCEMP1Q8IX19 187 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 NFKBIDQ8NI38 313 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 TSPEARQ8WU66 669 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 OIT3Q8WWZ8 545 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 ROBO4Q8WZ75 1007 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 PMM1Q92871 262 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 CGREF1Q99674 301 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 WFDC6Q9BQY6 131 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 COQ10BQ9H8M1 238 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 EXOSC3Q9NQT5 275 aaKnown RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 CTPS2Q9NRF8 586 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 ARMCX1Q9P291 453 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 LEF1Q9UJU2 399 aaPredicted RBP8.72□□□□□ -1.01
YBX3-212ENST00000542002 CLEC4AQ9UMR7 237 aa8.72□□□□□ -1.01
YBX3-212ENST00000542002 UNC79Q9P2D8 2635 aa8.71□□□□□ -1.01
YBX3-212ENST00000542002 A0A1W2PNR3 127 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 FXYD1O00168 92 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 DVL2O14641 736 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 TPST1O60507 370 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 ARAFP10398 606 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 COX6B1P14854 86 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 PGCP20142 388 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 ENPP1P22413 925 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 OPRM1P35372 400 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 CRISP3P54108 245 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 KRTAP10-9P60411 292 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 HOXC5Q00444 222 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 MERTKQ12866 999 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 EPS8Q12929 822 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 FADDQ13158 208 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 FBXL19-AS1Q494R0 122 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 GCNT6Q5T4J0 391 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 ZNF474Q6S9Z5 364 aaPredicted RBP8.71□□□□□ -1.02
YBX3-212ENST00000542002 ESPNLQ6ZVH7 1005 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 CHMP1BQ7LBR1 199 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 P4HA3Q7Z4N8 544 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 DHDDSQ86SQ9 333 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 LUZP2Q86TE4 346 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 CMIPQ8IY22 773 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 PEX5LQ8IYB4 626 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 WDR60Q8WVS4 1066 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 ST8SIA1Q92185 356 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 DNAJA3Q96EY1 480 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 KLHL15Q96M94 604 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 SFXN3Q9BWM7 321 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 ADAM19Q9H013 955 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 KAT8Q9H7Z6 458 aaKnown RBP8.71□□□□□ -1.02
YBX3-212ENST00000542002 THUMPD1Q9NXG2 353 aaKnown RBP8.71□□□□□ -1.02
YBX3-212ENST00000542002 ING1Q9UK53 422 aaPredicted RBP8.71□□□□□ -1.02
YBX3-212ENST00000542002 ZNF443Q9Y2A4 671 aaPredicted RBP8.71□□□□□ -1.02
YBX3-212ENST00000542002 ZNF175Q9Y473 711 aa8.71□□□□□ -1.02
YBX3-212ENST00000542002 IGHV3-15A0A0B4J1V0 119 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 CFAP73A6NFT4 308 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 A8MXE2 369 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 EEF1E1-BLOC1S5C9J1V9 151 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ANGPT2O15123 496 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 EEF1E1O43324 174 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 FRS3O43559 492 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 PABPC4LP0CB38 370 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 CCNA2P20248 432 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 DRD4P21917 467 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ME2P23368 584 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ELK4P28324 431 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 UQCRC1P31930 480 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 APOBEC1P41238 236 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 ASCL1P50553 236 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 SIRPAP78324 504 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms