RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CHI3L2Q15782 390 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 MS4A18Q3C1V0 323 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 OR8G2PQ6IF36 304 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ARHGAP11AQ6P4F7 1023 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ZYG11AQ6WRX3 759 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 TMEM184AQ6ZMB5 413 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 LANCL3Q6ZV70 420 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 NUFIP2Q7Z417 695 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ANKRD37Q7Z713 158 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 CATSPER3Q86XQ3 398 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 CLDN19Q8N6F1 224 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 Q8N9G6 341 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 EMG1Q92979 244 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RBM14Q96PK6 669 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 FAM173AQ9BQD7 235 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 OVOL2Q9BRP0 275 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 FEM1AQ9BSK4 669 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RPP25Q9BUL9 199 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 GON7Q9BXV9 100 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 NXF5Q9H1B4 397 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 SLC25A51Q9H1U9 297 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 IL1RL2Q9HB29 575 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 FGF22Q9HCT0 170 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 IL1RAPQ9NPH3 570 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 NDE1Q9NXR1 346 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 MRPL39Q9NYK5 338 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 AIPL1Q9NZN9 384 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 GALPQ9UBC7 116 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 SUN2Q9UH99 717 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 GSTK1Q9Y2Q3 226 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 EXOSC1Q9Y3B2 195 aaKnown RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ALG6Q9Y672 507 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 PLXNA1Q9UIW2 1896 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 SSC5DA1L4H1 1573 aa3.51□□□□□ -1.85
SNHG1-217ENST00000541578 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-217ENST00000541578 COL2A1P02458 1487 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TRGV8A0A0C4DH27 118 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TRBV7-9A0A0J9YWB2 115 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TRABD2BA6NFA1 517 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 HELTA6NFD8 242 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ZSCAN5BA6NJL1 495 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 POLR2DO15514 142 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 GPRIN2O60269 458 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ERLIN1O75477 346 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 NEBLO76041 1014 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 OAS1P00973 400 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 PATE4P0C8F1 98 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TRIM49P0CI25 452 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TRIM49CP0CI26 452 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 PNMTP11086 282 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ACADSP16219 412 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ZNF10P21506 573 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ATP5A1P25705 553 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SPRP35270 261 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 MAGEA8P43361 318 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 BRCC3P46736 316 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 AP3M2P53677 418 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 MFAP2P55001 183 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SYPL1Q16563 259 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 LRRC26Q2I0M4 334 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ZFP69Q49AA0 526 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ACER2Q5QJU3 275 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CELF3Q5SZQ8 465 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CCDC73Q6ZRK6 1079 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 STOX1Q6ZVD7 989 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 TGIF2LXQ8IUE1 241 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SLC22A9Q8IVM8 553 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 VSTM4Q8IW00 320 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SLC38A6Q8IZM9 456 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 MTURNQ8N3F0 131 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ARL14Q8N4G2 192 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 OR1B1Q8NGR6 318 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CNIH3Q8TBE1 160 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 C18orf25Q96B23 403 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SLC41A3Q96GZ6 507 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SH3YL1Q96HL8 342 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 C7orf34Q96L11 122 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CNOT6LQ96LI5 555 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 AGAP3Q96P47 875 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 LITAFQ99732 161 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 FAM192AQ9GZU8 254 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 POLR3FQ9H1D9 316 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 UPF3AQ9H1J1 476 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 RHOJQ9H4E5 214 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 FN3KRPQ9HA64 309 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 SGK2Q9HBY8 427 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 ETNK2Q9NVF9 386 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 UTP6Q9NYH9 597 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 RARRES3Q9UL19 164 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 EXOGQ9Y2C4 368 aaKnown RBP3.5□□□□□ -1.85
SNHG1-217ENST00000541578 CPQQ9Y646 472 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 PTPRFP10586 1907 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 RLFQ13129 1914 aa3.5□□□□□ -1.85
SNHG1-217ENST00000541578 MUC6Q6W4X9 2439 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms