RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 NUDT14O95848 222 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 LINGO3P0C6S8 592 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ENDOUP21128 410 aaKnown RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 MST1P26927 711 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 MSX1P28360 303 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 PPP1R8Q12972 351 aaKnown RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 PIN1Q13526 163 aaPredicted RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 CBFBQ13951 182 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 GANABQ14697 944 aaKnown RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF169Q14929 603 aaPredicted RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 QPRTQ15274 297 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ST3GAL2Q16842 350 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 PLEKHN1Q494U1 663 aaPredicted RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 COLEC12Q5KU26 742 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 HMBOX1Q6NT76 420 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF550Q7Z398 422 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 PIWIL3Q7Z3Z3 882 aaKnown RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF440Q8IYI8 595 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 LILRA2Q8N149 483 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 CADM2Q8N3J6 435 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 TMEM178AQ8NBL3 297 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 TOR1AIP2Q8NFQ8 470 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 OR4K17Q8NGC6 315 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 OR5M1Q8NGP8 315 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 C9orf43Q8TAL5 461 aaPredicted RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 LRTOMTQ8WZ04 291 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 TM9SF4Q92544 642 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF597Q96LX8 424 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF300Q96RE9 604 aaPredicted RBP8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZNF559Q9BR84 538 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZFP64Q9NPA5 681 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ARMC1Q9NVT9 282 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 VNN3Q9NY84 501 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 LUZP4Q9P127 313 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 VDAC3Q9Y277 283 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 PCDHGB7Q9Y5F8 929 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 NBEAQ8NFP9 2946 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ZGRF1Q86YA3 2104 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 A0A1B0GWA3 101 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 FAM166BA8MTA8 275 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 KLRC4-KLRK1H3BQV0 150 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 ZIC3O60481 467 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 DPM1O60762 260 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 CBR3O75828 277 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 WISP2O76076 250 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 GLSO94925 669 aaPredicted RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 PRSS23O95084 383 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 CELA3AP09093 270 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 RHCEP18577 417 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PGCP20142 388 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PTNP21246 168 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 SLC6A8P48029 635 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 CDH12P55289 794 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 SESN3P58005 492 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TAS2R41P59536 307 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 OCLNQ16625 522 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 NADK2Q4G0N4 442 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 AAGABQ6PD74 315 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PCSK4Q6UW60 755 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PLEKHM3Q6ZWE6 761 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 GDF7Q7Z4P5 450 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 AMIGO2Q86SJ2 522 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 ZNF605Q86T29 641 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 RANBP3LQ86VV4 465 aaPredicted RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 ZNF563Q8TA94 476 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 POC1BQ8TC44 478 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 ADAMTS16Q8TE57 1224 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 STMN2Q93045 179 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 POP5Q969H6 163 aaKnown RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 C1GALT1C1Q96EU7 318 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PKP2Q99959 881 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TRIM2Q9C040 744 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 SEMA6AQ9H2E6 1030 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 EVA1AQ9H8M9 152 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TMEM27Q9HBJ8 222 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 MED17Q9NVC6 651 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TAS2R10Q9NYW0 307 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 NKX1-2Q9UD57 310 aaPredicted RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 TESQ9UGI8 421 aaKnown RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 RIMS3Q9UJD0 308 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 ACAD8Q9UKU7 415 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 BOKQ9UMX3 212 aaPredicted RBP8.47□□□□□ -1.05
DDX55-208ENST00000541259 C15orf41Q9Y2V0 281 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TESMINQ9Y4I5 508 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 PCDHGB6Q9Y5F9 930 aa8.47□□□□□ -1.05
DDX55-208ENST00000541259 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 A0A0B4J2E0 115 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 A0A1B0GX12 115 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 FAAHO00519 579 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 CLOCKO15516 846 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 HNRNPRO43390 633 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 EFNA2O43921 213 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 MGRN1O60291 552 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 FMO6PO60774 539 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 OR5F1O95221 314 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms