RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TUFMP49411 452 aaKnown RBP3.91□□□□□ -1.78
YBX3-210ENST00000540975 MYL6P60660 151 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 SPAG1Q07617 926 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 SNX1Q13596 522 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 DOC2AQ14183 400 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 STK38Q15208 465 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 MAPRE2Q15555 327 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 SNCBQ16143 134 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 Q3ZCU0 254 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 CYBRD1Q53TN4 286 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 FBXO48Q5FWF7 155 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 KHDRBS2Q5VWX1 349 aaKnown RBP3.91□□□□□ -1.78
YBX3-210ENST00000540975 UHRF1BP1Q6BDS2 1440 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 TWF2Q6IBS0 349 aaKnown RBP3.91□□□□□ -1.78
YBX3-210ENST00000540975 CLEC2AQ6UVW9 174 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 FAM159AQ6UWV7 190 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 ZNF562Q6V9R5 426 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 P4HA3Q7Z4N8 544 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 C10orf67Q8IYJ2 551 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 ARFGAP2Q8N6H7 521 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 OR56B2PQ8NGI1 322 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 OR8K3Q8NH51 312 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 CDC26Q8NHZ8 85 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 ATP6V0A1Q93050 837 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 PLEKHF1Q96S99 279 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 BCL7BQ9BQE9 202 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 ZSCAN16Q9H4T2 348 aaPredicted RBP3.91□□□□□ -1.78
YBX3-210ENST00000540975 ANO10Q9NW15 660 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.91□□□□□ -1.78
YBX3-210ENST00000540975 APPL1Q9UKG1 709 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 DNPEPQ9ULA0 475 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 CFL2Q9Y281 166 aa3.91□□□□□ -1.78
YBX3-210ENST00000540975 KDM5DQ9BY66 1539 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 ARHGEF12Q9NZN5 1544 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 ANKRD36BQ8N2N9 1353 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 PARD3Q8TEW0 1356 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 KIF15Q9NS87 1388 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 SYNMO15061 1565 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 REREQ9P2R6 1566 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 DAPK1P53355 1430 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 ANKRD50Q9ULJ7 1429 aa3.9□□□□□ -1.78
YBX3-210ENST00000540975 CTAGE15A4D2H0 777 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 E9PMD0 336 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 DDX39AO00148 427 aaKnown RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 TRDMT1O14717 391 aaKnown RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 ATP8B1O43520 1251 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 SEC22BO75396 215 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ZCCHC18P0CG32 403 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 H2AFXP16104 143 aaPredicted RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 HLA-DPA1P20036 260 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 FUT3P21217 361 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 AXLP30530 894 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 OR1G1P47890 313 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ORC2Q13416 577 aaPredicted RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 WDR43Q15061 677 aaKnown RBP eCLIP3.9□□□□□ -1.79
YBX3-210ENST00000540975 LRRC23Q53EV4 343 aaPredicted RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 C6orf89Q6UWU4 347 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ZYG11AQ6WRX3 759 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 PAQR9Q6ZVX9 377 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 NLRP9Q7RTR0 991 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 CTAGE6Q86UF2 777 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ITPRIPQ8IWB1 547 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ZNF565Q8N9K5 539 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 CCNYQ8ND76 341 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 NEK11Q8NG66 645 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 TADA1Q96BN2 335 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 SNF8Q96H20 258 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 IL4I1Q96RQ9 567 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 CCT7Q99832 543 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 FANCEQ9HB96 536 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 PNO1Q9NRX1 252 aaKnown RBP3.9□□□□□ -1.79
YBX3-210ENST00000540975 NMRK1Q9NWW6 199 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 BCAP29Q9UHQ4 241 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 DDX19BQ9UMR2 479 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ADGRL2O95490 1459 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 KIAA0586Q9BVV6 1533 aa3.9□□□□□ -1.79
YBX3-210ENST00000540975 ANKRD30AQ9BXX3 1397 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 CFAP74Q9C0B2 1584 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 TTC26A0AVF1 554 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 GOLGA8SH3BPF8 625 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 PPIHO43447 177 aaKnown RBP3.89□□□□□ -1.79
YBX3-210ENST00000540975 NIPSNAP2O75323 286 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 FLOT1O75955 427 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 JCHAINP01591 159 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 SEMG1P04279 462 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 ZNF32P17041 273 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 HTD2P86397 168 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 MYBPC1Q00872 1141 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 HERPUD1Q15011 391 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 UBE2V2Q15819 145 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 IL23RQ5VWK5 629 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 OR5M10Q6IEU7 315 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 STAC2Q6ZMT1 411 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 FRA10AC1Q70Z53 315 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 KIAA1328Q86T90 577 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 GMCL1P1Q8NEA9 526 aa3.89□□□□□ -1.79
YBX3-210ENST00000540975 DDI1Q8WTU0 396 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms