RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ABCG2Q9UNQ0 655 aa4.03□□□□□ -1.76
SNHG1-214ENST00000540865 WBP11Q9Y2W2 641 aaKnown RBP4.03□□□□□ -1.76
SNHG1-214ENST00000540865 A0A0J9YW62 118 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 C1orf226A1L170 272 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 LRP5LA4QPB2 252 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 H0YIV9 168 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 K7EPI3 171 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FOXE1O00358 373 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 TNFSF11O14788 317 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GUCY1B2O75343 617 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 LYZL6O75951 148 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SEMA3DO95025 777 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SNUPNO95149 360 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 STAMBPO95630 424 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 NTN1O95631 604 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 KRT14P02533 472 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 S100BP04271 92 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 COX5AP20674 150 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ME2P23368 584 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GIFP27352 417 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FEN1P39748 380 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 OR3A2P47893 321 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 TAS2R39P59534 338 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GPX6P59796 221 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ATP6V0D1P61421 351 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SNRPD2P62316 118 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 PLP2Q04941 152 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 C17orf67Q0P5P2 114 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ILF2Q12905 390 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 STX5Q13190 355 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 RIN1Q13671 783 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ODF1Q14990 250 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF239Q16600 458 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 MST1LQ2TV78 715 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FBXO48Q5FWF7 155 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ARL13AQ5H913 290 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 CPTPQ5TA50 214 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 LIPJQ5W064 366 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 HBMQ6B0K9 141 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 NPSR1Q6W5P4 371 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 RINLQ6ZS11 566 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GLCCI1Q86VQ1 547 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GLB1L2Q8IW92 636 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SLC44A2Q8IWA5 706 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SLC43A2Q8N370 569 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 TEX29Q8N6K0 151 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 NAT8LQ8N9F0 302 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 GLB1L3Q8NCI6 653 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FAM110BQ8TC76 370 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF675Q8TD23 568 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 DUSP19Q8WTR2 217 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ABHD3Q8WU67 409 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 CPNE4Q96A23 557 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 ESAMQ96AP7 390 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 EFHD2Q96C19 240 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 CERS2Q96G23 380 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 REXO5Q96IC2 774 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 VSTM2LQ96N03 204 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SORCS2Q96PQ0 1159 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SEC61A2Q9H9S3 476 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FKRPQ9H9S5 495 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 HHATLQ9HCP6 504 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 PPANQ9NQ55 473 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 TIGARQ9NQ88 270 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 FAM120CQ9NX05 1096 aaKnown RBP4.02□□□□□ -1.77
SNHG1-214ENST00000540865 MKS1Q9NXB0 559 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 CD274Q9NZQ7 290 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SLC17A6Q9P2U8 582 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 USP22Q9UPT9 525 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 SPEF1Q9Y4P9 236 aa4.02□□□□□ -1.77
SNHG1-214ENST00000540865 NPIPA5A0A0B4J1W7 369 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 UBE2QL1A1L167 161 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 B4DSR2 109 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 NPIPA7E9PJI5 369 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 PHGDHO43175 533 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 RGS14O43566 566 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ERAL1O75616 437 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 WISP3O95389 354 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 FGGP02679 453 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 GBAP04062 536 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KLK1P06870 262 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 NPIPA8P0DM63 369 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 VSIG10L2P0DP72 767 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 HKR1P10072 659 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 CD1DP15813 335 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 IGHV1-2P23083 117 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 IL2RGP31785 369 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KHKP50053 298 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF83P51522 516 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SLC12A2P55011 1212 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 MRPS35P82673 323 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SPOCK1Q08629 439 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 FRG1Q14331 258 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ICAM4Q14773 271 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 OR4D1Q15615 310 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 LTB4RQ15722 352 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ADRM1Q16186 407 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KCTD19Q17RG1 926 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms